Gene Information

Name : Ple7327_4122 (Ple7327_4122)
Accession : YP_007082810.1
Strain : Pleurocapsa minor PCC 7327
Genome accession: NC_019689
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4399552 - 4400307 bp
Length : 756 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGCTGTCTCTCGACGTACCTCAGAGTTCTTCTAAGCCTGAATTCGTCAATACCAGTCGCATTCTCGTCGTCGAAGACGA
AGATGTCATTCGGGACATGATAGTTTTAGCTTTAGAAGAAGAAGGTTATGAGGTGATAACGGCAAGCGATGGACGAACAG
CCCTAAATTTACTGCAAAACCCTGCTTCTGGGGATAGCGAGGAATCCTTCGATCTAGTCATTCTAGATCTAATGTTGCCT
CAAGTTCACGGGTTGGATATTTGTCGCCTGCTGCGCTATCAAGGCAATATCGTTCCGATTCTAATGCTAAGTGCTAAAGC
GAGCGAAACCGATCGCGTTCTCGGACTAGAAGTGGGAGCCGATGATTATCTGACCAAACCATTCAGCATGCGCGAGTTAG
TAGCTCGCTGTCGTGCTCTCCTGCGCCGTCAGAGTTTCGGCAACTTGTCTCAAACGTCAATAATCCGCAAGTTTCGAGAT
ATTTCTCTCTACACCCAAGAATGTCGCGTCATCGTCCGAGGCGAGGAAATTAATCTATCTCCTAAAGAATTCCGCTTGCT
AGAACTATTCATGAGCTACCCCCGTCGAGTTTGGTCGCGAGAGCAACTCATCGAACAGGTGTGGGGGCCCGATTTTTTGG
GAGATACCAAAACAGTAGACGTTCACATTCGCTGGTTGCGAGAAAAGTTAGAACTCGATCCCAGTCAACCAGAATACTTG
ATTACGGTTCGCGGGTTTGGCTACCGATTTGGTTGA

Protein sequence :
MLSLDVPQSSSKPEFVNTSRILVVEDEDVIRDMIVLALEEEGYEVITASDGRTALNLLQNPASGDSEESFDLVILDLMLP
QVHGLDICRLLRYQGNIVPILMLSAKASETDRVLGLEVGADDYLTKPFSMRELVARCRALLRRQSFGNLSQTSIIRKFRD
ISLYTQECRVIVRGEEINLSPKEFRLLELFMSYPRRVWSREQLIEQVWGPDFLGDTKTVDVHIRWLREKLELDPSQPEYL
ITVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-36 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 3e-42 47
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 2e-42 45
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 2e-42 45
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 2e-45 45
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 2e-42 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 2e-42 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 2e-42 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 2e-42 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 3e-42 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 2e-42 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 2e-42 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 2e-42 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-45 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 7e-36 44
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 1e-41 43
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 1e-37 43
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 2e-33 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 2e-33 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 2e-33 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 2e-33 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 2e-33 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 2e-33 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 2e-33 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 2e-33 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 8e-31 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 6e-30 41
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 6e-37 43
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-28 43
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-37 42
Ple7327_4122 YP_007082810.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 9e-37 42