Gene Information

Name : Ple7327_3760 (Ple7327_3760)
Accession : YP_007082489.1
Strain : Pleurocapsa minor PCC 7327
Genome accession: NC_019689
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3996940 - 3999405 bp
Length : 2466 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCTATAAAGGTGATCATGCTCGCCCAAGAGGAAGCTCGTCGCTTGGGACATAATTT
CGTAGGCACGGAGCAAATACTTCTTGGGTTAATTGGCGAAGGGACTGGCGTTGCCGCCAAGGTTCTAAAATCCATGGGGG
TCAATCTCAAAGATGCCCGGATTGAAGTCGAAAAGATCATTGGTCGCGGGTCCGGTTTCGTGGCGGTGGAAATTCCTTTC
ACCCCAAGAGCCAAGAGAGTTCTCGAACTTTCCCTCGAAGAAGCTCGTCAACTCGGTCACAACTACATCGGCACAGAACA
CTTACTTCTCGGCTTGATTCGGGAAGGAGAAGGGGTTGCCGCTAGAGTTTTGGAAAATCTAGGAGTTGACCTCGCCAAAG
TTCGGACTCAGGTGATTCGGATGCTGGGCGAAACGGCTGAGGTTTCGACGACACCGGGCGCTCAAGGACGCACGAAAACG
CCAACCTTGGACGAATTTGGCTCTAACCTCACTCAAATGGCAAGCGAGGGTAAGCTAGATCCCGTTGTAGGACGGCAAAA
AGAAATCGAGCGCGTCATTCAGATTTTAGGTCGCCGTACCAAAAACAATCCCGTTCTCATTGGCGAACCGGGGGTGGGAA
AGACCGCGATCGCAGAAGGTCTGGCACAGCGCATCGCCAACAAGGATGTTCCCGATATCTTGGAAGAAAAGCGAGTCGTC
ACGCTCGATATCGGCTTGCTGGTCGCCGGAACCAAGTATCGCGGGGAATTTGAAGAACGCCTCAAGAAAATTATGGACGA
AATCCGTCAAGCCGGAAACGTGATTCTGGTAATTGACGAAGTTCATACCCTCATCGGTGCGGGTGCAGCCGAAGGCGCGA
TCGATGCGGCAAATATCCTCAAACCCGCCTTGGCAAGAGGAGAATTGCAGTGCATCGGCGCGACTACCCTCGACGAGTAC
CGCAAGCACATCGAACGCGATGCAGCACTAGAGCGTCGCTTTCAACCAGTGATGGTGGGCGAACCTACCGTAGAAGAGAC
GATCGAAATCCTCTACGGCTTAAGAGAACGCTACGAACAACACCACAAGCTGAAGATTTTGGACGAGGCTTTAGAGGCAG
CAGCCAAGCTTTCGGATCGCTACATCAGCGATCGCTATCTGCCAGATAAAGCGATCGACCTTATCGACGAAGCCGGATCG
CGCGTGCGCTTGATCAACTCGCAACTGCCGCCAGCCGCTAAGGAACTCGATAAAGAACTGCGTCAGATCCTCAAGCAAAA
AGACGATGCAGTAAGGGCGCAGGACTTCGATCGCGCGGGAGAGCTGCGCGATCGCGAAATGGAAATCAAGTCACAAATTC
GGGCGATCGCCTCTTCTAAGAAGAACGAAGGCGAAGGAGACGAACCCGTCGTCACCGCAGAAGAAATCGCCAACATCGTC
GCCTCTTGGACTGGCGTTCCGGTTAACAAGCTCACGGAAACCGAATCCGAGAAGCTACTGCACATGGAAGATACCTTGCA
CCAGCGTCTCATCGGTCAAGAAGATGCCGTCAAAGCCGTTTCTCGCGCTATTCGTCGCGCCAGAGTCGGTCTGAAGAACC
CCAACCGACCCATTGCTAGCTTCATCTTCTCCGGTCCCACGGGAGTCGGTAAGACAGAACTGACCAAGGCGTTGGCTGCC
TACTTCTTCGGTTCTGAAGAGGCAATGATCCGTTTGGATATGTCGGAGTACATGGAACGCCATACCGTATCCAAGCTGAT
CGGTTCGCCGCCGGGATATGTCGGGTATAACGAAGGCGGTCAGCTTACCGAAGCTGTGCGTCGCCGTCCTTATACTGTCG
TCCTCTTCGACGAAATCGAAAAGGCGCATCCCGATGTCTTCAACATGTTGCTGCAAATTCTCGAAGACGGTCGCTTGACC
GATGCCAAGGGTCGGACGGTAGACTTCAAGAATACGCTGCTAATCATGACCTCGAACATCGGCTCGAAGGTGATTGAAAA
AGGCGGCGATCGCTTGGGATTCGAGTTTGAAGTAGACCAAGCCGAAGCCCAGTACAATCGGATTCGCTCCTTAGTTAACG
AGGAACTCAAACAGTACTTCCGTCCTGAATTCCTCAACCGGATCGACGAAATCATCGTCTTCCGTCAACTGACCAAGGAA
GAGGTCAAGCAAATCGCCGATATCCTCCTCAAGCAGGTCTTTGCACGACTGACGGAACAAAATATCAACCTAGAAGTGAC
CGAGAAGTTCAAAGAACGTCTGGTCGAAGAAGGTTACAACCCCGCTTATGGGGCAAGACCCTTACGTCGAGCTATTATGC
GTCTGTTAGAAGACGTGCTGGCTGAAGAAATCCTTTCCGGTCGCATCCAGGAAGGAGATACAGCTGTCGCCGATATCGAC
GAGGAAGGCAAGGTGAAGATCGTTCTTGGCGAAAGGCAGCAGCTTTTAGCTCAAGCAACTGATTGA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVSTTPGAQGRTKT
PTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEEKRVV
TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIERDAALERRFQPVMVGEPTVEETIEILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGS
RVRLINSQLPPAAKELDKELRQILKQKDDAVRAQDFDRAGELRDREMEIKSQIRAIASSKKNEGEGDEPVVTAEEIANIV
ASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAA
YFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLT
DAKGRTVDFKNTLLIMTSNIGSKVIEKGGDRLGFEFEVDQAEAQYNRIRSLVNEELKQYFRPEFLNRIDEIIVFRQLTKE
EVKQIADILLKQVFARLTEQNINLEVTEKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGRIQEGDTAVADID
EEGKVKIVLGERQQLLAQATD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ple7327_3760 YP_007082489.1 chaperone ATPase VFG0079 Protein 0.0 62
Ple7327_3760 YP_007082489.1 chaperone ATPase VFG0080 Protein 1e-155 52