Gene Information

Name : Nos7524_5219 (Nos7524_5219)
Accession : YP_007078540.1
Strain : Nostoc sp. PCC 7524
Genome accession: NC_019684
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6199461 - 6202103 bp
Length : 2643 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGCAGCCTACAGATCCTAATAAATTTACTGATAAAGCCTGGGAAGCAATTGTGAAATCTCAGGATATAGTTCGTGCATA
TCAACAACAGCAACTAGATGTTGAACATTTAATTATTGCGCTATTAGAAGAGCCTACAAGTTTAGCAATCCGAATTTTGG
CTCGTGCAGAAGTTGATCCTGTCCGCTTACAACAGCAATTAGAAGCTTTTACTCAACGTCAACCTAAAGTTGGCAAAAGT
GATCAGCTTTACCTCGGTCGTAGCTTAGATACGATGCTTGACCGCGCTGAAGAAATTAGGGCGCGGATGAAAGATGGCTA
TATTTCTGTGGAACATATTCTGTTAGCTTTTGCTGATGATGAGCGTGTTGGTAGACGGGTACTCAAAGGTTTTAATGTAG
ACAATATCAAAATAGAAGCCAGTATTAAAGCAGTTCGCGGTAGTCAAAAAGTGACAGACCAAAATCCAGAATCCCGCTAT
GAAGCCCTACAAAAATTTGGTCGGGATTTAACAGAACAGGCAAAATCAGGGAAGTTAGACCCAGTAATTGGGCGGGATGA
TGAAATTCGCCGCGTAATTCAGGTGTTATCTCGCCGGAGTAAGAATAACCCGGTGTTGATTGGTGAACCAGGGGTGGGTA
AGACTGCGATCGCCGAAGCTCTGGCACAACGTATCATCAATGGTGATGTCCCAGAATCTCTGAAAAATCGGCAACTCATC
TCTTTAGATATCGGTAGTTTAATCGCTGGGGCAAAATACCGGGGTGAATTTGAAGACCGTCTGAAAGCTGTTCTCCGGGA
AGTTACGGAATCCAACGGTCAAATTGTTCTGTTTATCGATGAACTGCATACAGTTGTTGGTACAGGCTCAAATCAACAAG
GGGCGATGGATGCGGGAAATTTACTCAAACCTATGTTGGCGCGGGGCGAACTGCGGTGTATTGGGGCGACTACCCTCGAT
GAATACCGCAAGTTTATTGAGAAAGATGCAGCCCTAGAACGTCGCTTTCAGCAGGTATATGTTGATCAGCCCAGTGTGGA
GAATACAATCTCGATTCTCCGGGGTTTGAAGGAACGCTACGAAGTCCATCACAATGTGAAAATTTCTGACTCGGCGTTGG
TGGCGGCGGCGACTTTATCGGCGCGTTATATTTCTGATCGGTTTTTACCAGATAAAGCCATTGATTTGGTAGATGAAGCC
GCAGCCCAGTTAAAAATGGAGATTACCTCCAAACCATCAGAATTAGAAACCATTGACCGCCGCTTGATGCAGCTAGAAAT
GGAAAAGCTATCTCTAGCTGGGGAAGAGAAAGTTCCAGCCCAAACTAAGGAGCGTTTGGAGCGCATTGAGCTAGAAATTG
CTAATTTAACTAAAAAACAACAGGATTTAAGCAATCAATGGCAAGGTGAAAAGCTACTATTGGAAGCCATCAGTGCTTTA
AAGAAAGAAGAAGAAGCTTTAAGAACTCAGATTGAACAAGCCGAACGCGCCTACGATTTGAATAAAGCGGCTCAGTTGAA
GTATGGCAAATTGGAGGGAGTACAGCGCGATCGCGAGTCGAAAGAAGCGAAGCTGTTAGAATTACAAAGCCAAGGTTCTA
CCCTCCTACGCGAACAAGTCACCGAAGCCGACATCGCAGAAATCGTTGCTAAGTGGACAGGTATCCCCGTTAATCGCCTC
CTGGAATCAGAACGGCAAAAATTACTGCAATTAGAAAGCCATTTACATCAACGTGTGATCGGTCAACAGGAAGCCGTAGA
AGCAGTTTCCGCCGCCATTCGTCGCGCCCGTGCGGGGATGAAAGACCCCAACCGCCCCATCGGTTCATTTTTATTCATGG
GGCCGACTGGTGTCGGTAAAACCGAACTCGCCCGCGCCTTAGCCCAATTTCTCTTTGACTCGGATGATGCTTTAGTGCGC
CTCGATATGTCCGAGTACATGGAAAAACACTCAGTTTCACGCTTAGTGGGTGCGCCTCCTGGTTACATAGGCTACGAAGA
AGGCGGACAACTTTCAGAAGCTATTCGCCGTCATCCCTATTCAGTAGTGCTTTTGGATGAAGTAGAGAAAGCCCACCCCG
ATGTGTTCAATATCTTGTTACAGGTGTTAGATGATGGAAGAATTACTGATTCTCAGGGAAGAACTGTAGATTTTCGCAAC
ACAGTGATTGTGATGACCAGTAACATTGGTAGTGAACATATATTAGATGTGTCTGGTGATGATTCCCAGTATGAGACAAT
GCGAAATCGGGTAATGGATGCCTTGCGATCGCACTTCCGCCCCGAATTTCTCAACCGCGTTGATGATATAATTCTCTTCC
ACACCCTCAGCCGTTCTGAAATGCAGCATATTATCCGCATTCAACTCAAGCGTGTGGAAAATCTGCTACGAGAGCAAAAA
ATATCCTTTGAAATCTCCCCAGCCGCTTGTGATTTCTTAGTTGAACGTGGTTATGATCCAGTTTACGGCGCACGTCCCCT
GAAACGTTCCATTCAGCGAGAAATTGAAAACCCTATTGCTACCAAGTTATTGGAAAATACTTTTATTGCTGGAGACACCA
TTTACATTGACAAAGGTGAAAATGGGTTGGCTTTCAGCAATAAAGCACCAGTTAAGGTTTCAGTGCCACAGATTATGACC
TAG

Protein sequence :
MQPTDPNKFTDKAWEAIVKSQDIVRAYQQQQLDVEHLIIALLEEPTSLAIRILARAEVDPVRLQQQLEAFTQRQPKVGKS
DQLYLGRSLDTMLDRAEEIRARMKDGYISVEHILLAFADDERVGRRVLKGFNVDNIKIEASIKAVRGSQKVTDQNPESRY
EALQKFGRDLTEQAKSGKLDPVIGRDDEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEALAQRIINGDVPESLKNRQLI
SLDIGSLIAGAKYRGEFEDRLKAVLREVTESNGQIVLFIDELHTVVGTGSNQQGAMDAGNLLKPMLARGELRCIGATTLD
EYRKFIEKDAALERRFQQVYVDQPSVENTISILRGLKERYEVHHNVKISDSALVAAATLSARYISDRFLPDKAIDLVDEA
AAQLKMEITSKPSELETIDRRLMQLEMEKLSLAGEEKVPAQTKERLERIELEIANLTKKQQDLSNQWQGEKLLLEAISAL
KKEEEALRTQIEQAERAYDLNKAAQLKYGKLEGVQRDRESKEAKLLELQSQGSTLLREQVTEADIAEIVAKWTGIPVNRL
LESERQKLLQLESHLHQRVIGQQEAVEAVSAAIRRARAGMKDPNRPIGSFLFMGPTGVGKTELARALAQFLFDSDDALVR
LDMSEYMEKHSVSRLVGAPPGYIGYEEGGQLSEAIRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRN
TVIVMTSNIGSEHILDVSGDDSQYETMRNRVMDALRSHFRPEFLNRVDDIILFHTLSRSEMQHIIRIQLKRVENLLREQK
ISFEISPAACDFLVERGYDPVYGARPLKRSIQREIENPIATKLLENTFIAGDTIYIDKGENGLAFSNKAPVKVSVPQIMT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-110 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7524_5219 YP_007078540.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-122 43
Nos7524_5219 YP_007078540.1 ATP-dependent chaperone ClpB VFG2084 Protein 6e-118 42