Gene Information

Name : Nos7524_5007 (Nos7524_5007)
Accession : YP_007078329.1
Strain : Nostoc sp. PCC 7524
Genome accession: NC_019684
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5939096 - 5941714 bp
Length : 2619 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGCAACCAACTAATCCAAACCAATTTACAGAAAAAGCCTGGGAAGCGATCGCCCACACTCCTGAGATTGCTAAACAGCA
TCAACAGCAGCAGATAGAAAGCGAACACCTGATGAAAGCACTGCTAGAACAAGAAGGTTTAGCTAGCGGGATTTTGACTA
AAGCAGGTGTGAACTTACAAAAAATCAACGATCGCACTGAACAATTTATCCAACGCCAGCCGAAAGTCTCAGGTAGTAGC
ACCTCTGTATACTTGGGGCGGAGTTTGGATACACTCTTAGACCGCGCTGAAGGTTATCGTAAAGATTTTAAAGACGAATA
TATTTCTATTGAACATTTATTTCTGGCTTACGCTAAAGATGATCGCTTCGGCAAAGGTTTATTTCAAGAATTCGGTTTAG
ACGAAAACAAACTCAAAAATATTATTAAACAAGTTCGTGGGAGTCAGAAAGTGACCGACCAAAATCCAGAAGGCAAATAC
CAATCGCTGGAAAAATACGGGCGTGATCTCACAGAAGCAGCCCGCAAAGGTCAACTTGATCCAGTCATTGGGCGGGATGA
TGAAATTCGCCGCACCATCCAGATTTTGTCTCGTCGTACCAAAAATAACCCCGTGTTAATTGGTGAACCAGGTGTTGGTA
AAACTGCGATCGCCGAAGGATTAGCACAGCGTATCGTGGCTGGTGATGTTCCTCAATCCCTCAAAGACCGCAAGTTAATT
TCCTTAGATATGGGTGCGATGATTGCGGGGGCAAAATTCCGGGGAGAATTTGAGGAACGCCTGAAAGCTGTATTAAAGGA
AGTCACAGAATCTGGCGGCAATATTGTTTTATTTATTGATGAAATTCATACCGTTGTCGGTGCAGGTGCAACTCAAGGCG
CAATGGATGCGGGTAACTTGTTAAAACCCATGCTAGCGCGGGGTGAGTTGCGTTGTATCGGGGCGACAACTTTAGATGAA
TATCGCAAATATATCGAAAAAGATGCAGCTTTAGAAAGACGCTTCCAGCAAGTTTATGTAGATCAGCCCAGTGTTGCAGA
TACAATTTCTATTTTGCGGGGCTTGAAGGAACGCTATGAGGTTCACCACGGGGTGAAAATCTCTGATAGTTCTTTAGTTG
CAGCCGCTACCTTGTCTAGCCGTTATATTAGCGATCGCTTCCTACCAGATAAAGCCATTGATTTGGTAGACGAAGCTGCC
GCTAGGTTAAAAATGGAGATTACCTCTAAACCGGAAGAACTAGACGAAATCGACCGCAAAATTTTGCAGTTGGAAATGGA
GAAGCTATCTTTGCAAAAAGAAAGTGATGCCGCTTCCCGCGAACGTTTAGAAAGACTGGAAAAAGAACTGGCGGATCTCA
AAGAAGAACAAAGAACTCTCAATGCTCAATGGCAGTCTGAAAAAGATATTATTACAAAGCTTCAGTCTGTCAAAGAAGAA
ATTGACCGAGTAAACTTAGAGATTCAACAAGCAGAGAGAAACTACGACCTCAATCGGGCTGCTGAGTTGAAATATGGTAA
GTTAACGGACTTGCATCGGCGATTAGAAGGCACAGAAAGAGAGTTATCCCAAGCCCAAGGTACAGGTAAATCCTTGTTGC
GGGAAGAAGTAACCGAAGCTGACATTGCGGAAATTATTTCTAAGTGGACGGGAATACCCATCAGCAAGTTAGTGGAATCA
GAGAAAGAGAAACTCCTGCACTTAGAAGAAGAACTGCATCACCGGGTAATTGGACAATCGGAAGCTGTAACAGCTGTCGC
CGATGCGATTCAGCGATCGCGTGCTGGATTAGCTGATCCGAATCGTCCCATTGCTAGTTTTGTTTTCCTCGGCCCCACTG
GTGTAGGTAAAACCGAGTTAGCCAAGGCATTAGCGGCGTATATGTTCGACACCGAAGAAGCACTGGTGCGGATTGATATG
TCGGAATATATGGAGAAACACGCCGTTTCTCGGTTAATCGGTGCGCCTCCCGGATACGTGGGTTATGAAGAAGGGGGACA
ACTGACTGAAGCGATTCGTCGCCGTCCTTACGCCGTGATTCTCTTTGACGAAATCGAGAAAGCCCACCCCGATGTGTTTA
ATATTTTCCTGCAAATTCTCGATGATGGTCGCGTTACCGATGCCCAAGGTCATACCGTGGACTTTAAGAACACGATTATT
ATTATGACCAGCAACATCGGTTCACAGTACATTCTGGATGTAGCTGGGGATGACTCCCGCTATGATGAAATGCGTCATCG
GGTGATGGAAGCGATGAGAAATAGTTTCCGGCCTGAGTTTCTCAACCGGATTGATGAGATTATCATCTTCCACGGTTTGG
ATAAGAAGGAACTGCGGCAGATTGTGCAGTTGCAAGTGGAAAGATTAAGGGATAGGTTAGGCGATCGTAAGATGTCATTG
CGACTTTCTGAGGCTGCACTTGACTTTTTGGCTGAGGTAGGATACGACCCAGTATTTGGAGCGCGTCCACTGAAGCGGGC
GATTCAGCGCGAGTTAGAAACGCAAATTGCTAAGGCGATTTTGCGCGGAGAGTTTAACGATGGGGATACTATTTTTGTTG
ATGTGCAGAATGAAAGGTTGTCTTTTAGTCGTTTACCTGTTGAGGTATTTAGTAGTTAG

Protein sequence :
MQPTNPNQFTEKAWEAIAHTPEIAKQHQQQQIESEHLMKALLEQEGLASGILTKAGVNLQKINDRTEQFIQRQPKVSGSS
TSVYLGRSLDTLLDRAEGYRKDFKDEYISIEHLFLAYAKDDRFGKGLFQEFGLDENKLKNIIKQVRGSQKVTDQNPEGKY
QSLEKYGRDLTEAARKGQLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLI
SLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYVDQPSVADTISILRGLKERYEVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAA
ARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDAASRERLERLEKELADLKEEQRTLNAQWQSEKDIITKLQSVKEE
IDRVNLEIQQAERNYDLNRAAELKYGKLTDLHRRLEGTERELSQAQGTGKSLLREEVTEADIAEIISKWTGIPISKLVES
EKEKLLHLEEELHHRVIGQSEAVTAVADAIQRSRAGLADPNRPIASFVFLGPTGVGKTELAKALAAYMFDTEEALVRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTII
IMTSNIGSQYILDVAGDDSRYDEMRHRVMEAMRNSFRPEFLNRIDEIIIFHGLDKKELRQIVQLQVERLRDRLGDRKMSL
RLSEAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEFNDGDTIFVDVQNERLSFSRLPVEVFSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7524_5007 YP_007078329.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-115 42
Nos7524_5007 YP_007078329.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-105 42