Gene Information

Name : Nos7524_4567 (Nos7524_4567)
Accession : YP_007077912.1
Strain : Nostoc sp. PCC 7524
Genome accession: NC_019684
Putative virulence/resistance : Virulence
Product : type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5465249 - 5467261 bp
Length : 2013 bp
Strand : -
Note : PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein

DNA sequence :
ATGACTCAATCTTCACCACAACGGCGCAGTACCGCACTCACTACAAGAACCGAGTTTTCGCCTTTTGGTAACAAGCTAGT
GCAATCTGGCTATGTAAATAACGACCAAATGAGGCAGGCGCTGATTGAAAGTCGCAAGTCTGGTAGACCCTTGACGGAAG
TGCTAGAGTCAATCACTGGACGACAATTATCACCTGAGTTTCTCAGGCAGTACAAGAAACAGCAATTATTTGAACTGAAG
ATACTATACGGTGTTGAATTCCTTGATCCGGAAGTCAATAATCTTGGCAATACGATGGTGGGGCAACTGATAGAAACCCT
CATCCCAGTGGATATCTGTCGCCGCCATCGTTTAGTCCCCCTATCTAGAAATGATGAACAAAAACCGCCCTATGTTTTAG
TGGCAATGGTTGATCCGGACAACTTAGAAGCGTCGGATGACCTCAACCGGATCTTGCGTCCCCAAGGTTTGGCATTACAG
CGCATGGTAATTACTCAGGAGGATTACCAACAGTTAATCAACCAATACTTGGATGAGTTGGCTGTCCGCCAAAAGCATAT
AGAACAAGAAAAATTTACAGATATTAATCAGGATTTAGAAAACCTCGGCAATCTCGATATTCAGGATGCGCCTGAAGAAA
TGGAGGCTGATTTAGGATCAGCAATGAAAGGTGCAGAGGATGCGCCAGTCATCAACCTTGTAAATCGCATCCTAGCTAAA
GCTCTGCACGATAAGGTTTCTGATATCCACGTCGAACCCCAAGAAGAAAATCTGCGGATTCGCTTTCGTAAGGATGGGGT
ATTACGGGAGGCTTTTGACCCCCTACCGAAAAAAATTATTCCCGCCGTCACAGCCAGATTTAAAATCATCTCTAACTTGG
ATATTGCTGAGAGACGTTTACCCCAAGACGGAAGGATTCGGCGGATGTTCGAGGGACGCAAAGTAGACTTCCGGGTGAAT
ACTTTGCCCAGTCGCTACGGGGAAAAGGTAGTGCTGCGGATTTTAGATAACTCTTCTACGCAATTAGGACTAAATAAGTT
AATTACCGACCCAGAAACCTTGCAAATTGTCCAAGATATGGTAAGTAAGCCTTTTGGGTTAATTTTGGTAACTGGGCCTA
CGGGTTCTGGTAAAACAACTTCACTATATTCAGCACTGGCAGAGAAGAACTCACCAGGGATTAATATCAGCACCGTAGAA
GATCCCATTGAGTACAGCTTGCCAGGGATTACACAAGTACAGGTAATTCGGGAAAAAGGTTTAGATTTTGCGACAGCTTT
GCGGGCATTTTTGCGACAAGATCCCGATGTGCTGCTAGTGGGTGAAACGCGGGATAAAGAAACAGCCAAAACAGCGATTG
AAGCTGCGTTGACTGGTCACTTAGTATTAACTACTTTACACACCAATGATGCTCCTGGTGCGATCGCACGTTTAGGAGAA
ATGGGTATTGAACCATTCATGGTTTCTAGTTCGTTGATTGGGGTATTGGCACAACGTCTAGTGCGGCGTGTTTGTTCTGA
TTGTCGCATTCCCTATACTCCCACACCTGAAGAATTAGCACGTTATGGGATGTCTGCTTCCCAAGAAGTCAACGTTACCT
TCTATAAAGCTAATACTGTACCACCAGAAGCGATCGCTGAAACCAAAGCCAAAAATCAGCTTTGTCCCAGCTGTAACGGT
GTCGGCTATAAAGGCCGTTGTGGTGTTTATGAAGTCATGCGGGTGACTGAAAACCTGCAAACTTTAATCAACGAAGAAGC
TCCCACAGAACGCATCAAAGAAGTAGCGGTAGAAGAAGGCATGAAAACCCTACTGGCGTACAGCTTAGACTTAGTTCGCC
AAGGTTCCACCACCCTAGAAGAAGTAGAACGGGTGACATTCACAGACACAGGTTTAGAAGCTGAATTAAAAGCCAAGCGT
AAAAGTGGACTTACCTGCCGCACCTGTAACGCCGTATTACAACCAGAATGGCTAGATTGTCCCTACTGTATGACACCTCG
GTTTGAGGATTAG

Protein sequence :
MTQSSPQRRSTALTTRTEFSPFGNKLVQSGYVNNDQMRQALIESRKSGRPLTEVLESITGRQLSPEFLRQYKKQQLFELK
ILYGVEFLDPEVNNLGNTMVGQLIETLIPVDICRRHRLVPLSRNDEQKPPYVLVAMVDPDNLEASDDLNRILRPQGLALQ
RMVITQEDYQQLINQYLDELAVRQKHIEQEKFTDINQDLENLGNLDIQDAPEEMEADLGSAMKGAEDAPVINLVNRILAK
ALHDKVSDIHVEPQEENLRIRFRKDGVLREAFDPLPKKIIPAVTARFKIISNLDIAERRLPQDGRIRRMFEGRKVDFRVN
TLPSRYGEKVVLRILDNSSTQLGLNKLITDPETLQIVQDMVSKPFGLILVTGPTGSGKTTSLYSALAEKNSPGINISTVE
DPIEYSLPGITQVQVIREKGLDFATALRAFLRQDPDVLLVGETRDKETAKTAIEAALTGHLVLTTLHTNDAPGAIARLGE
MGIEPFMVSSSLIGVLAQRLVRRVCSDCRIPYTPTPEELARYGMSASQEVNVTFYKANTVPPEAIAETKAKNQLCPSCNG
VGYKGRCGVYEVMRVTENLQTLINEEAPTERIKEVAVEEGMKTLLAYSLDLVRQGSTTLEEVERVTFTDTGLEAELKAKR
KSGLTCRTCNAVLQPEWLDCPYCMTPRFED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-74 43
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-74 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7524_4567 YP_007077912.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG2048 Protein 1e-73 42