Gene Information

Name : Nos7524_4486 (Nos7524_4486)
Accession : YP_007077836.1
Strain : Nostoc sp. PCC 7524
Genome accession: NC_019684
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 5368552 - 5370078 bp
Length : 1527 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGTCGGAAGAAGATATCCGTGCCGCCAGGCTGGAGAAAGTAGAACAACTCAAGCAGCTAGGGACTAACCCCTACGCCTA
TCGTTGGGAATCTACCCATCATGCAGCCCAATTGCAAGAAAAATTTGCCGATTTACCCAGTGGCGAAGAAGTTGAATTAG
AAGTAGCCATTGCTGGACGCATTATGGCGCGTCGGGTTTTCGGTAAATTGGCTTTTTTCACCTTGGAAGATGAAACAGGC
ACAATTCAGCTGTATTTGGAGAAAAATCGTATCCAGGAAAATATGGCAGAGGTTGATGCCGATGCCTTCAATCATCTCAA
GCAACTCACAGATGTAGGGGACATCCTCGGAGTTACAGGTACTATCAAACGGACTGAAAAGGGCGAGTTATCGGTTTACG
TCAAACAATACACCATCCTCACTAAATCCCTTCTGCCCCTACCCGACAAGTGGCATGGGTTGACGGATGTTGCCAAGCGA
TACCGTCAACGCTACGTTGACTTGATTGTTAACCCCGAAGTCCGCCAAACTTTTCGTCGTCGCGCCCAAATTACGGCGGG
TATTCGTCGCTATTTGGAACAACGAGATTTTTTAGAAATTGAAACGCCAGTTTTGCAAAGTGAAGCAGGCGGTGCTGATG
CACGTCCGTTCATCACCTACCACAACACCCTGGAAATGGAGTTGTATCTGCGAATTGCCACAGAACTCCATCTCAAACGG
TTGATTGTGGGTGGTTTTGAAAAGGTGTTTGAACTGGGGCGAATTTTCCGCAATGAGGGAATTTCAACACGGCACAACCC
CGAATTTACCTCAATTGAAATTTATCAAGCCTACGCCGATTACAACGATATGATGGCGCTCACAGAAGGTATTATCACCA
CTGTGGCGCAAGAAGTTCTCGGCACACTGCAAATTACCTACCAAGGTGAAACTGTAGACTTAACACCACCTTGGCGGCGG
GTGACAATGCACGATTTAGTTAAAGAATCTACCGGCTTAGATTTCAACTCTTTCCCAACTTTGGCAGAAGCTAAAGCAGC
TAGTAAAAATGCTGGACTGACAGGTATAGAAGATGTAACTTCAATTGGCAAACTCTTAAATGAAGCCTTTGAACAAAAGG
TAGAAACCAACTTAATTCAGCCTACCTTTGTGATTGACTATCCTGTAGAAATTTCACCACTCGCCAAACCTCACCGTTCT
CAGCCTGGCTTGGTGGAACGCTTTGAGTTATTTATAGTTGGGCGGGAAACTGCCAACAGTTTCTCAGAATTAACTGATCC
CATCGATCAAAGAGAACGCCTAGAAGCACAAGCCGCGCGGAAAGCTGCCGGGGACTTAGAGGCTCAAGGTGTGGATGAAG
ACTTCCTTGCTGCTTTGGAATATGGTATGCCACCCACTGGGGGCTTAGGTATTGGGATTGATCGGTTAGTCATGTTATTA
ACTGATTCTGCTAGTATCCGCGATGTCATTGCTTTCCCCTTACTCAAGCCAGAAAAATCAGAACCTGCCCCAGAATCAGC
ACCTTAG

Protein sequence :
MSEEDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLPSGEEVELEVAIAGRIMARRVFGKLAFFTLEDETG
TIQLYLEKNRIQENMAEVDADAFNHLKQLTDVGDILGVTGTIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKR
YRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFITYHNTLEMELYLRIATELHLKR
LIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEIYQAYADYNDMMALTEGIITTVAQEVLGTLQITYQGETVDLTPPWRR
VTMHDLVKESTGLDFNSFPTLAEAKAASKNAGLTGIEDVTSIGKLLNEAFEQKVETNLIQPTFVIDYPVEISPLAKPHRS
QPGLVERFELFIVGRETANSFSELTDPIDQRERLEAQAARKAAGDLEAQGVDEDFLAALEYGMPPTGGLGIGIDRLVMLL
TDSASIRDVIAFPLLKPEKSEPAPESAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 9e-108 48
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 3e-85 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7524_4486 YP_007077836.1 lysyl-tRNA synthetase VFG1668 Protein 5e-108 48