Gene Information

Name : Nos7524_4127 (Nos7524_4127)
Accession : YP_007077494.1
Strain : Nostoc sp. PCC 7524
Genome accession: NC_019684
Putative virulence/resistance : Virulence
Product : Mn2+/Zn2+ ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4965521 - 4966375 bp
Length : 855 bp
Strand : -
Note : PFAM: ABC 3 transport family

DNA sequence :
ATGATTCTAGAAGCTTTAATTGAGCCATTGCAGTATGGCTTTATGCAGCGATCGCTTGTAATTGCTATTTTAGTAGGCTT
GTTGTGTGCAGTTGTCGGTAGTTACCTCATGGTGCAAAGACTAGCACTCTTAGGTGATGCTATCAGCCACTCAGTTTTAC
CAGGACTAGCGATCGCTTTTATGCTGGGAGGGAATATTTTCATTGGCGCATTTATCGCTGGGGTATTTAGTACCGTAGCG
ATTACCTGGATCAGAACGCGATCGCCTATCAAAGAAGATGCCGCAATGGGCATAGTTTTTTCTGCATTCTTTGCCCTAGG
GATTACCTTAATTACTATTATTCAAAAAGATAATAAAATTGACCTCAACCATTTTTTATTCGGCAATATTCTTGGCGTAA
CTGTTAACGAAGTACGTGATACAGCTATTATTGCCGTGATTGTTTTATTAGTGATTGTTTTATTATATAAAGAACTATTA
TTTTACACCTTTGACCCCTTGGGCGCTCAAGCCGCAGGTTTACCAGTTAATCGGCTCAACTTTGGTTTGATGCTGTTGAT
TTCCTTAACTATTGTTGCCAGTATGAAAGCAGTGGGTGTGATTTTAGTGCTATCACTATTAATTACACCAGGAGCTACTG
CATATTTATTAGTGAAACGTTTACACGAAGTGATGATTTTAGGTGCATTGATTGGCGTAGTTTCTAGTATTAGTGGTATG
TATCTCAGCTACTTTTATAATTTACCTTCTGGACCAGCAATTGTCTTAGTAGTGTCAGGATTATTTTTGTTAGCATTATT
ATTTAGTCCCAAACACGGTATTTTAATCCCCACAAGTAAACAAAAAAATTATTGA

Protein sequence :
MILEALIEPLQYGFMQRSLVIAILVGLLCAVVGSYLMVQRLALLGDAISHSVLPGLAIAFMLGGNIFIGAFIAGVFSTVA
ITWIRTRSPIKEDAAMGIVFSAFFALGITLITIIQKDNKIDLNHFLFGNILGVTVNEVRDTAIIAVIVLLVIVLLYKELL
FYTFDPLGAQAAGLPVNRLNFGLMLLISLTIVASMKAVGVILVLSLLITPGATAYLLVKRLHEVMILGALIGVVSSISGM
YLSYFYNLPSGPAIVLVVSGLFLLALLFSPKHGILIPTSKQKNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-41 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-41 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-41 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-41 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-41 42
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 2e-38 41
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7524_4127 YP_007077494.1 Mn2+/Zn2+ ABC transporter permease BAC0442 Protein 6e-44 44
Nos7524_4127 YP_007077494.1 Mn2+/Zn2+ ABC transporter permease BAC0352 Protein 1e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7524_4127 YP_007077494.1 Mn2+/Zn2+ ABC transporter permease VFG0528 Protein 1e-41 42