|
Name : Nos7524_3392 (Nos7524_3392) Accession : YP_007076783.1 Strain : Nostoc sp. PCC 7524 Genome accession: NC_019684 Putative virulence/resistance : Unknown Product : site-specific recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 4150082 - 4151182 bp Length : 1101 bp Strand : - Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family DNA sequence : ATGTTAGTTCAAAAAGGTCAGCTACTGGATTCAAATCGCCCAATATGGATCGTGCTAGATGACGACTACTTACCCATCGA GCCAATCCAAAAATACCTACGTTACTTAGACAGTTTAGAAAAGTCACCCAACACAGTTAGGGTTTACGCCAACAACCTAA AGTTATTCTGGGAGTTTTTACGAGATAAGCAAATTGATTGGAAGGAAATAAATCTAGAGCAGTTATCGGATTTTATTCAC TGGCTAAGAAGTCCAGAACCAGGAGTAGTATCCATTCAACCACAAGTGTCTAAACGGTCAGAAAAGACAATTAACCATGC TCTAACGACTGTCTGTGGTTTTTATGAATTTCATGAGCGATTGGGAGCAACTGAAGGGGTTAATGCTTATCGCTATCAGA TGCAACCAGGACGAAAATACAAGCCATTTTTACACCACATAAGCAAAGGGAAGGAAGTTAAAACACGATTACTGAAAATT AAAGAACCAAAAACTTTCCCAGGATGTTTAACTTCGGAGCAGGTTAAAGAATTAGTTAATGCTTGTAAAAGAATTAGAGA TAAATTTATTATCTGTTTACTTTATGAAACTGGCATGAGAATTGGTGAGTTATTAGGACTAAGACATGAGGATATTCGTT CACAAGGAGTAAATGAAATTCATGTAATACCCAGAACTGACAATATAAATATTAGTCGGGCAAAGGCAGGATTTGAAAGA GTAATTCATGTTTCCAAAGATTTGATGAAACTCTACTCTAATTATCTGATTGAAGAATATCCAGACGATATTGACTGTGA TTATGTATTTGTTAACTGTTGGGACGGTGAAATAGGTCAACCGATGGATTATGGTGCTGTGAATGGACTGTTTAAAAGGT TAGCCAAGAAAACAGGTATTCAAGCGACACCTCATTTACTTAGACACACTCATGCTACAGAGTTAATTAGGTCTGGATGG GATATGGCGTATGTCCAAAAGCGATTGGGTCACGCAAACATTCAAACTACTATTAACACTTATGTTCATCTAACAGATGA TGACTTACAGAAAGAATATCAAAAATATTTGACAAAGAGAGATGGCTTCAATGAATCATGA Protein sequence : MLVQKGQLLDSNRPIWIVLDDDYLPIEPIQKYLRYLDSLEKSPNTVRVYANNLKLFWEFLRDKQIDWKEINLEQLSDFIH WLRSPEPGVVSIQPQVSKRSEKTINHALTTVCGFYEFHERLGATEGVNAYRYQMQPGRKYKPFLHHISKGKEVKTRLLKI KEPKTFPGCLTSEQVKELVNACKRIRDKFIICLLYETGMRIGELLGLRHEDIRSQGVNEIHVIPRTDNINISRAKAGFER VIHVSKDLMKLYSNYLIEEYPDDIDCDYVFVNCWDGEIGQPMDYGAVNGLFKRLAKKTGIQATPHLLRHTHATELIRSGW DMAYVQKRLGHANIQTTINTYVHLTDDDLQKEYQKYLTKRDGFNES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | BAC53829.1 | transposase A(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 7e-79 | 45 |
| tnpA | BAC57491.1 | transposaseA | Not tested | Type-IIIinv SCCmec | Protein | 7e-79 | 45 |
| unnamed | BAA82201.1 | transposaseA | Not tested | Type-II SCCmec | Protein | 7e-79 | 45 |
| tnpA1 | YP_039526.1 | transposase A 1 | Not tested | Type-II SCCmec | Protein | 1e-78 | 45 |
| tnpA | NP_370580.1 | transposase A | Not tested | Type-II SCCmec | Protein | 1e-78 | 45 |
| tnpA | NP_373292.1 | transposase A for Tn554 | Not tested | Type-II SCCmec | Protein | 1e-78 | 45 |
| tnpA-3 | YP_190048.1 | transposase A | Not tested | Type-II SCCmec | Protein | 1e-78 | 45 |
| tnpA | BAB47667.1 | transposase A(Tn554) | Not tested | Type-III SCCmec | Protein | 7e-79 | 45 |
