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Name : Nos7524_0152 (Nos7524_0152) Accession : YP_007073671.1 Strain : Nostoc sp. PCC 7524 Genome accession: NC_019684 Putative virulence/resistance : Unknown Product : site-specific recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 177230 - 178810 bp Length : 1581 bp Strand : - Note : PFAM: Insertion element protein; Phage integrase family DNA sequence : ATGAATCATGACTATATTCCACAAACTCAAGAAAAAAAGACTCAACTTCAGGCAGTTAAAAAATCAACTATAAATTGTCC TAAATGTGGCAGCATAGATTATCATAAAGCTGGCATTAATCCAACAGGAAAACAAAAATATCGTTGCAAACAATGTCAAC ACAAGTTTGTAATAAATCCATCGGCTAGTCATATAAAAATACTAGACGATTATTGGACTGCTTCAGAATTAGGATTACAA GTTAGCCCACACCATAATGATGGAGATAAACTAAATTTTTCCTCTATTCAACAGGAATGGCTAAAACAAGATATTAAAAG ATTTATTAGATATATTGCTACGACAACAACTAGCTTTGAAAAGCTACAAAAATATTTGTCTTGTTTCAGGAATTTTTCAA GATTTATATCTCAAAATAAAATAGTAAATCGAATAGAAGATATAACTCGCTCTGTAATTATCGACTACCTAGATTATCTT AATCAAAAACATCTAGCTCCAGCAACTAAAGGTGAACGTATCTCTGCTATAGCTTCTTTATTTGAAACTGGTGTTACTAA TAAATGGTTTAATGTAGAACCTTACTTAATTCGTAAAGAGGATTATCCTAGTCGCCCAAAATCATTACCTCGTTATATTC CAGATGAAGTGATTCGTCAATTAAATGAACACCTAGATGCCTTACCTGAGCCAATAACAAGAATGGTGCTGGTTATTCAA GAATGTGGTTTGAGAGTAGGAGAATTATGTCAACTACCTTTAGATTGCCTTAAGCAAGATAGTAAAGGTGGATGGTTTAT TCAATTTATGCGTTGGAAGATGAAGTTTGAAACTACCTTGCCTATATCTATAGAGCTTGCCCAGGCTATTAAAGAGCAGC AAGCTTACATTCAAAAACATTTTGGTAAAGACTATAAATATCTTTTCTGCGGTAGAAAAGCATCGCCAGAATTTATTCCT GAACCTAAAGTTATGACCGACCAATCGTTTGCTAATCATTTAAAACACTTGGCAGAGGAATTTAATATTTGCGATAGCAC GGGCAAGAGATGGAATTTTCAGACTCATCAGTTTCGCCATACTGTTGGGACAAGAATGATTAATAATGGAGTGCCACAGC ATATTGTCCAACGATATTTAGGTCATGATTCACCTCACATGACTATGGTTTATGCTCATATTCATGATGCGACATTAAGA AAAGAAATAGACAAATATCTTGATAATAAAGTAGTCAATATTAATGGCGAAGTTATTGAATCACTTCATCCAGAATTAGA CAATGATAGTGGTCTGCAATGGATGAAGAAAAAAGTTTTGGCTGAAACTTTAGCAAATGGATATTGTGGACTACCCGCAC AGCTTACCTGTAGTAAGGGCAATGCCTGCCTAACCTGCGGTGATTTTCGTACAACCATTGAGTTTTTAGACCAACATAAG GAACATTTAGAGCGTACTAATAAAGTTCTCGAAGTAGCTAAAACTAATGGTTGGCAACGTCAAATTCAAGTTAATGAAGA TGTTAAAAAAAATCTAGAAAATATCATCAATACTCTGGAGGGCAACAAGAATGAGCAATGA Protein sequence : MNHDYIPQTQEKKTQLQAVKKSTINCPKCGSIDYHKAGINPTGKQKYRCKQCQHKFVINPSASHIKILDDYWTASELGLQ VSPHHNDGDKLNFSSIQQEWLKQDIKRFIRYIATTTTSFEKLQKYLSCFRNFSRFISQNKIVNRIEDITRSVIIDYLDYL NQKHLAPATKGERISAIASLFETGVTNKWFNVEPYLIRKEDYPSRPKSLPRYIPDEVIRQLNEHLDALPEPITRMVLVIQ ECGLRVGELCQLPLDCLKQDSKGGWFIQFMRWKMKFETTLPISIELAQAIKEQQAYIQKHFGKDYKYLFCGRKASPEFIP EPKVMTDQSFANHLKHLAEEFNICDSTGKRWNFQTHQFRHTVGTRMINNGVPQHIVQRYLGHDSPHMTMVYAHIHDATLR KEIDKYLDNKVVNINGEVIESLHPELDNDSGLQWMKKKVLAETLANGYCGLPAQLTCSKGNACLTCGDFRTTIEFLDQHK EHLERTNKVLEVAKTNGWQRQIQVNEDVKKNLENIINTLEGNKNEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | BAB47666.1 | transposase B(Tn554) | Not tested | Type-III SCCmec | Protein | 1e-78 | 42 |
| tnpB | BAC53828.1 | transposase B(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 1e-78 | 42 |
| tnpB1 | YP_039525.1 | transposase B 1 | Not tested | Type-II SCCmec | Protein | 2e-78 | 42 |
| tnpB | BAA82202.1 | transposaseB | Not tested | Type-II SCCmec | Protein | 1e-78 | 42 |
| tnpB | NP_370579.1 | transposase B | Not tested | Type-II SCCmec | Protein | 2e-78 | 42 |
| tnpB | NP_373291.1 | transposase B for Tn554 | Not tested | Type-II SCCmec | Protein | 2e-78 | 42 |
| tnpB-3 | YP_190049.1 | transposase B | Not tested | Type-II SCCmec | Protein | 2e-78 | 42 |
| unnamed | BAB47606.1 | transposase B of Transposon Tn554 | Not tested | Type-III SCCmec | Protein | 3e-76 | 42 |
| tnpB | BAC57490.1 | transposaseB | Not tested | Type-IIIinv SCCmec | Protein | 2e-77 | 42 |
| tnpB | BAC57471.1 | transposase B | Not tested | Type-IIIinv SCCmec | Protein | 1e-77 | 42 |
