Gene Information

Name : Nos7524_0104 (Nos7524_0104)
Accession : YP_007073625.1
Strain : Nostoc sp. PCC 7524
Genome accession: NC_019684
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 120278 - 122848 bp
Length : 2571 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGGTTCCTGGATGTTTATTCTCTTTATACAGGCATCCCAAACCTGAGCCTGTGCTAAAATCAGCGTACCGGCACGACGC
AGGTGATGGGAAAAATGCCATGTTTGAACGCTTCACAGAAAAAGCCATTAAGGTAATCATGCTGGCCCAAGAAGAGGCCC
GCCGTTTAGGTCACAACTTCGTTGGAACCGAGCAGATCCTCCTGGGTCTGATTGGGGAAGGCACGGGAGTTGCGGCCAAG
GTGCTGAAATCGATGGGTGTCAATCTCAAAGATGCCCGCATTGAGGTAGAAAAAATCATAGGCCGGGGTTCGGGCTTTGT
GGCCGTGGAAATTCCGTTTACGCCACGGGCAAAGCGGGTTCTGGAACTATCCCTAGAAGAAGCGCGCCAATTAGGGCATA
ACTACATTGGCACCGAGCATCTGCTGTTGGGCCTGATCCGGGAAGGGGAAGGTGTGGCAGCCAGGGTGCTAGAAAACCTG
GGGGTGGATCTATCTAAGGTCAGAACTCAAGTCATTCGGATGTTGGGAGAAACCGCCGAGGTTTCAGCGACCGGTTCATC
TGGGCGCACCAAAACACCAACTTTGGATGAATTTGGCTCGAACCTGACCCAAATGGCCACGGATAACAAGCTCGATCCTG
TGGTGGGACGTGCCAAGGAAATTGAGCGGGTAATCCAAATATTGGGTCGCCGGACAAAAAATAATCCAGTATTAATTGGT
GAACCTGGGGTTGGTAAAACCGCGATCGCCGAAGGTCTAGCATCACGCATCGCTAATAAAGATGTCCCCGACATCCTAGA
AGATAAGCGTGTTGTCACCTTAGATATCGGCTTGCTGGTTGCGGGTACTAAATACCGGGGTGAATTTGAAGAACGCTTGA
AGAAAATCATGGATGAGATTCGACAAGCGGGTAATGTAATTCTGGTAATAGACGAAGTACACACCCTCATTGGTGCAGGT
GCAGCCGAAGGGGCGATTGATGCGGCGAATATCCTCAAGCCAGCTTTGGCCAGAGGCGAATTGCAGTGCATCGGCGCAAC
AACCTTGGATGAGTACCGCAAGCACATTGAACGGGACGCAGCACTAGAACGCCGCTTCCAACCAGTGATGGTAGGTGAGC
CTTCCGTCGATGAAACAATAGAAATTTTATATGGTTTGCGCGATCGCTACGAGCAACACCACAAACTGAAAATCTCCGAT
GAAGCTTTAGTGGCGGCGGCAAAATTATCTGATCGTTATATTAGCGATCGCTATCTGCCAGACAAAGCCATCGACTTGAT
TGATGAGGCTGGTTCTCGTGTGCGGTTAATTAACTCTCAACTACCCCCCGCAGCCAAAGAGTTAGATAAAGAACTGCGCC
AAATCTTAAAAGAAAAAGATGATGCTGTCCGTTCCCAAGACTTTGACAGAGCTGGGGAACTGCGCGATCGGGAAATGGAA
ATCAAAGCCGAAATCCGTGCGATCGCTCAAAGCAAAGCTAACGGTGCAAGCGGTGACGGTGTAGAACCTGTAGTTACAGA
AGAAGACATCGCCCACATCGTCGCTTCCTGGACAGGCGTACCGGTGAACAAACTCACCGAATCCGAATCTGAGAAACTGC
TGCACATGGAAGACACCTTGCATCAGCGACTCATCGGTCAAGAAGATGCAGTCAAAGCAGTTTCCCGCGCCATTCGCCGG
GCGCGTGTCGGTTTGAAGAATCCCAATCGACCCATTGCTAGCTTTATCTTCTCCGGGCCGACTGGTGTAGGTAAAACCGA
ATTGGCGAAATCCTTGGCTTCTTACTTCTTCGGTTCAGAAGAAGCAATGATCCGCTTGGATATGTCCGAGTACATGGAAC
GCCACACCGTCAGCAAATTGATCGGTTCGCCTCCAGGTTACGTTGGTTATAACGAAGGTGGACAATTAACCGAAGCTGTA
CGCCGTCGTCCTTACACTGTCGTGCTGTTCGACGAAATCGAAAAAGCGCACCCCGATGTCTTCAATATGCTGCTGCAAAT
TTTAGAAGACGGTCGGTTAACAGATGCGAAAGGACGCACCGTTGACTTCAAGAACACCTTGCTGATTTTGACCTCCAACA
TCGGTTCTAAGGTAATTGAAAAAGGTGGCGGTGGTATCGGTTTCGAGTTTGGCGAAGACCAAAGCGAATCTCAATACAAC
CGGATTAAGAACTTGGTCAACGAAGAACTCAAACAATACTTCCGTCCTGAGTTCCTCAACCGTCTAGATGAAATTATCGT
CTTCCGTCAGTTGAGCAAGCTTGAAGTTACCGAAATTGCGGACATCATGCTCAAGGAAGTATTTGGTCGCTTGACAGAAA
AAGGTATAACCTTAGAAGTTAGCGATCGCTTCAAAGACCGCCTCATCCAAGAAGGTTACTCTCCCAGCTACGGTGCAAGA
CCATTACGCCGTGCAATCATGCGCTTGTTAGAAGATAGCTTGGCGGAAGAAATTCTGTCTGGTCGCATCAAAGATGGCGA
TGTCGCCTTAGTTGATGTTGATGAGAATGGGAATGTCCAAGTTAGCTCTCAACAGCGTCGGGAGTTGTTACCCCAAGGCG
TTGAGTCTTAG

Protein sequence :
MVPGCLFSLYRHPKPEPVLKSAYRHDAGDGKNAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAK
VLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENL
GVDLSKVRTQVIRMLGETAEVSATGSSGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNNPVLIG
EPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAG
AAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISD
EALVAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDRAGELRDREME
IKAEIRAIAQSKANGASGDGVEPVVTEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRR
ARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAV
RRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFGEDQSESQYN
RIKNLVNEELKQYFRPEFLNRLDEIIVFRQLSKLEVTEIADIMLKEVFGRLTEKGITLEVSDRFKDRLIQEGYSPSYGAR
PLRRAIMRLLEDSLAEEILSGRIKDGDVALVDVDENGNVQVSSQQRRELLPQGVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7524_0104 YP_007073625.1 chaperone ATPase VFG0079 Protein 0.0 59
Nos7524_0104 YP_007073625.1 chaperone ATPase VFG0080 Protein 1e-153 52