Gene Information

Name : Lepto7376_3566 (Lepto7376_3566)
Accession : YP_007072591.1
Strain : Leptolyngbya sp. PCC 7376
Genome accession: NC_019683
Putative virulence/resistance : Unknown
Product : rhomboid family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3943887 - 3944495 bp
Length : 609 bp
Strand : -
Note : PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: syp:SYNPCC7002_A1359 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Rhomboid family protein

DNA sequence :
ATGAGCCGCCAAAATCATCAAACATCTGAGGCGATCGCCAAGGAAGTCACCCAGCAAGTCACCATCATTGGGGGATTTCT
ATTGATCTTTTGGATTCTGGAAATTAGTGACCAATTTATTTTCCAAAATCTCTGGCGTGGTGGCCTTGATATCTATGGCA
TTATGCCTCGTAATATGACAGGATTACGCGGTGTTTTATTTGCCCCATTTTTGCATGGCGACTTTCAGCATCTCATAGCC
AATAGCATTCCTTTCGCGATTCTCGGTTGGCTCGTGATGTTTCAGCGCATCAGGGACTTTTGGGTTGTGACGGCCAGTGC
CACATTGGTCGGAGGGCTGGGAGTCTGGCTTGTTGGTGCCCAGAACTCGGTACATTTAGGCGCTAGCATCCTTATTTTTG
GCTACCTTGGCTTTTTACTCTTTCGCGGCTATTTCCAACGAGATATCCCGTCGATTGCCATCGCTTGTGTTGTGTTCTTT
TTCTATGGCAGTGTGCTTTGGGGTGTGTTGCCGACAGCTCCTGGTGTGTCTTGGGAAGGTCATTTATTTGGCTTAATCGG
TGGTGGTGTCGCAGCAAAACTTTTAAGCCAATCGAAGCATAAAGCCTAA

Protein sequence :
MSRQNHQTSEAIAKEVTQQVTIIGGFLLIFWILEISDQFIFQNLWRGGLDIYGIMPRNMTGLRGVLFAPFLHGDFQHLIA
NSIPFAILGWLVMFQRIRDFWVVTASATLVGGLGVWLVGAQNSVHLGASILIFGYLGFLLFRGYFQRDIPSIAIACVVFF
FYGSVLWGVLPTAPGVSWEGHLFGLIGGGVAAKLLSQSKHKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1469 YP_001800863.1 hypothetical protein Not tested Not named Protein 6e-10 44