Gene Information

Name : Lepto7376_3146 (Lepto7376_3146)
Accession : YP_007072214.1
Strain : Leptolyngbya sp. PCC 7376
Genome accession: NC_019683
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3473817 - 3475202 bp
Length : 1386 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: syp:SYNPCC7002_A0831 thiamine biosynthesis protein ThiC; PFAM: Thiamine

DNA sequence :
ATGAGAGCTGATTGGGTTGCCAAACGGCAAGGTCAAGGTAATGTTTCGCAGATGCACTACGCACGCAAAGGCATCATTAC
CGAAGAGATGGATTATGTTGCAAAGCGGGAAAACCTTCCCGGCGATCTAATCCGAGACGAAGTGGCGCGTGGACGGATGA
TTATTCCCGCGAATATTAACCACACAAACTTGGAACCGATGGCGATCGGCATTGCCTCCAAGTGCAAAGTCAACGCAAAC
ATCGGTGCATCACCAAACTCTTCTGAAATTAATGAAGAACTAGAAAAGATGCATCTCGCCGTGAAATATGGCGCAGACAC
CATCATGGACCTCTCTACTGGTGGCGGTAACCTCGATGAAATTCGTACAGCCATTATCAATGCTTCTCCCGTGCCTATCG
GAACAGTGCCTATTTATCAAGCACTCGAAAGCGTCCATGGCGAAATGTCGAACCTGACTGCCAACGATTTTCTCCACATC
ATCGAGAAGCACGCGCAGCAAGGTGTGGACTATATGACCATCCATGCTGGGATTTTGATCGAGCATCTTCCTCTCGTACG
CAATCGCATTACAGGTATTGTGTCCCGTGGCGGTGGTATTTTGGCTCGCTGGATGATGCACCACCATAAGCAAAATCCTC
TCTACACTCACTACGCTGACATTATCGAAATTTTCAAGCGTTATGATGTGTCCTTCAGTTTGGGTGATTCTCTACGTCCG
GGTTGTACTCATGATGCTTCGGACGATGCTCAGCTCGCAGAACTGAAGACTCTTGGTCAACTCACTCGCCGCGCATGGGA
AGATGACATTCAAGTGATGGTGGAAGGCCCCGGTCACGTCCCCATGGATCAGATCGAGTTTAATGTGCGTAAGCAAATGG
AAGAGTGTTCTGAAGCGCCTTTCTATGTGCTTGGGCCTTTGGTTACTGATATCGCCCCCGGCTATGACCACATCACTTCG
GCGATTGGTGCAGCAATGGCTGGCTGGTACGGCACTGCGATGCTTTGCTACGTTACGCCCAAAGAACACCTCGGTCTACC
TAATGCTGAAGATGTTCGTAATGGTTTAATCGCTTATAAAATTGCAGCCCACGCCGCAGATATTGCTCGCCATCGTCCTG
GCGCGCGCGATCGCGATGATGAACTCTCGGCAGCACGTTACAACTTTGATTGGGATAAGCAGTTTGAATTGTCTCTCGAT
CCTGAGCGTGCTCGCGAATATCACGATGAAACTCTTCCCGCAGATATCTACAAAACTGCTGAGTTCTGCTCCATGTGTGG
ACCTAAGTTCTGCCCCATGCAAACCAAAGTTGATGCCGATGCATTAACCGAACTTGAGAAGTATCTCGCTAGTACATCTT
CAACAGAAGAATTAGCAAAAGCTTAA

Protein sequence :
MRADWVAKRQGQGNVSQMHYARKGIITEEMDYVAKRENLPGDLIRDEVARGRMIIPANINHTNLEPMAIGIASKCKVNAN
IGASPNSSEINEELEKMHLAVKYGADTIMDLSTGGGNLDEIRTAIINASPVPIGTVPIYQALESVHGEMSNLTANDFLHI
IEKHAQQGVDYMTIHAGILIEHLPLVRNRITGIVSRGGGILARWMMHHHKQNPLYTHYADIIEIFKRYDVSFSLGDSLRP
GCTHDASDDAQLAELKTLGQLTRRAWEDDIQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRPGARDRDDELSAARYNFDWDKQFELSLD
PERAREYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDADALTELEKYLASTSSTEELAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-124 62
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-124 62
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 7e-120 56