Gene Information

Name : Lepto7376_2464 (Lepto7376_2464)
Accession : YP_007071577.1
Strain : Leptolyngbya sp. PCC 7376
Genome accession: NC_019683
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2772985 - 2773971 bp
Length : 987 bp
Strand : +
Note : PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: syp:SYNPCC7002_A1735 periplasmic solute binding protein; PFAM: ABC transporter metal-bindin

DNA sequence : 
ATGGTCTTAATGCCACGCTTCCGCAGAAAAATAGCATTATCTAGCGTTTTGCTCGGACTATGGTTAGTCGGTTGTAATCC
AGAATCTCCTAATGTCTCAACGTCAACGGAACAATCGGAAACCGAGACACCAGCAACAGAGCAAGATGGGCGAAAAAAAG
TTTTAACGACGTTTAGTGTGTTGGCTGATATTGCGCAAAATGTGGCGGGCGATCGCCTCGTCGTTGAGTCCATCACAAAA
ATTGGAGCAGAAATTCACGGTTATGAACCGACGCCGAGTGATTTGGTGCGGGCGCAAGATGCGGATCTGCTGCTTTACAA
CGGTATGAATCTCGAACGCTGGTTTGAACAATTTTTGGGTAACCTTGAGGATGTGCCATCAATTATTTTGACCGAAGGTA
TTGAGCCGATTCCCATTGCCTCTGGCCCTTACACCGACAAGCCAAATCCCCATGCTTGGATGTCGCCGCAGAATGCTTTG
ATTTATGTGGAAAATATTCGCCAAGCTTTTGTTGAGCTAGATCCAGAAAATGCGGATTATTACACCGCCAATGCAGAAAC
CTATAGTGCAGAAATTCAGGCGATCGCCGATCAATTAGAAGCTGATTTAAGCCTTGTGCCAGAAGAGCAACGATATCTGG
TGAGTTGTGAAGGCGCTTTTTCGTATCTCGCTCAAGATTATGGCCTTGAAGAAATCTATATTTGGCCGATTAATGCTGAG
CAACAATTTACCCCCAAGCAAGTGCAAGGCGTGATCGAAGAAGTGAAAGACAATAATGTGCCAACTATTTTCTGCGAAAG
TACCGTTAGTGATGAAGGCCAAAAAGAAGTGGCAAAAGCATCCGGCGCAAGATTTGGTGGCAACCTCTATGTGGATTCTC
TTTCCACTGAAGAAGGTCCAGTGCCTTCCTATATTCAACTCCTCGAATATGATGCTCGCACCATCGCCAATGGTCTGTTA
GCAGGGAGCCAAATCCAAAACGAATAA

Protein sequence : 
MVLMPRFRRKIALSSVLLGLWLVGCNPESPNVSTSTEQSETETPATEQDGRKKVLTTFSVLADIAQNVAGDRLVVESITK
IGAEIHGYEPTPSDLVRAQDADLLLYNGMNLERWFEQFLGNLEDVPSIILTEGIEPIPIASGPYTDKPNPHAWMSPQNAL
IYVENIRQAFVELDPENADYYTANAETYSAEIQAIADQLEADLSLVPEEQRYLVSCEGAFSYLAQDYGLEEIYIWPINAE
QQFTPKQVQGVIEEVKDNNVPTIFCESTVSDEGQKEVAKASGARFGGNLYVDSLSTEEGPVPSYIQLLEYDARTIANGLL
AGSQIQNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-77 57
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-77 57
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-77 57
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-77 57
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-77 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lepto7376_2464 YP_007071577.1 periplasmic solute binding protein BAC0439 Protein 2e-79 60
Lepto7376_2464 YP_007071577.1 periplasmic solute binding protein BAC0349 Protein 6e-78 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lepto7376_2464 YP_007071577.1 periplasmic solute binding protein VFG0525 Protein 6e-78 57