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Name : Lepto7376_1204 (Lepto7376_1204) Accession : YP_007070395.1 Strain : Leptolyngbya sp. PCC 7376 Genome accession: NC_019683 Putative virulence/resistance : Virulence Product : type II secretion system protein E (GspE) Function : - COG functional category : - COG ID : - EC number : - Position : 1338812 - 1340080 bp Length : 1269 bp Strand : + Note : PFAM: Type II/IV secretion system protein; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482; KEGG: gvi:gll0921 general secretion pathway protein E; PFAM: Type II secretion system protein E; SPT DNA sequence : ATGGTAAATTTCCAAGCCAAGGATCAGACTGGACAAATTAAACAAATTTTGCGCCATGCTCTCGATAACCGCGCGAGTGA TATTCATCTAGAGCCGACGACTGATGGCTTAAAGATTCGCTATCGAGTCGATGGTATGTTGCGCCATATCCAGACGTTAC CGCTGGAGATTAGTCGCAAATTAATCGTGGCGCTTAAGGTGATGTGCGATATGGATATTGCTGAAAGCCGTGTGCCGCAG GATGGACGAATTGGCGAAAAATACTTTGGTGGCGAACTCATCAAGGGTTTGGATTTGCGAGTTTCGACGTTGCCCTGTGT GAGCAATACCAAAGGGGATGTAGCGGAAAAAGCAGTGTTGCGGCTACTACGTCAGCAAAATTCGTTTAAAACAGTTGCCG ATTTGGGGTTTTCGCGGCGATCGCGGTCGAAATTTGAAGGCTATCTCAATCAGCCCCAAGGCCTCGTGATTTTAACGGGG CCCACTGGATCCGGGAAAACCAGCACACTCTATACGAGTTTGGTTGGGGTGGCGACCGAGGAAGTCAATATCATTACGGT TGAAGATCCTGTGGAATACTTGTTGCCAAATATCACCCAAACCCAAGTGAATGAAGCCGCTGGGATGACATTCGCGAAAA GTCTGAAGGCGATTTTGCGTCAGGATCCAGACATCATCATGCTCGGTGAAATTCGTGACGCTGAAACAGTTGAAACCTCT ATTCGTGCTGCGCTGACAGGACACCTTGTTTTGACGACGCTCCACACAAATGATGCAATTGGTGCCATTCCTCGTCTTAA GGATCTCGGCCCAGACCCAGCATTAATTAGTGATGCTTTGCTAGGTGTTGTCGCCCAAAGATTGATTCGGGTGAATTGTC CCCATTGCAGCGAACCCTATCAACCCATAGCTGCGGATTGGCATCAGCTGGATCTGACTCCCAAAGAATTTGCCTCAAAA AATTGGCGTAAGGGTCGTGGTTGTGAGCATTGTTTTGGGTCTGGCTATCTAGGGCGTGAAGCAATTGTGGAATTACTACA TGTCGATGATGCGGTGCGACAAATTATTTATGAAGGTTCAATTACCCAGCTTCGTCACTATCTCCAGCAAAGTGAGTTTG AGTCGTTCCGGCGCGCGGCGATCGCCAAAGTGATTAATGGAATTACGACCGTGGAAGAAATTTGTCGAGTTTTACCGCGC AGCGTTTTGCAAAATCCACAGCCCCTTCTGAAAAAAAGATCACCCACTACTTTAATTAATGCATCCTAA Protein sequence : MVNFQAKDQTGQIKQILRHALDNRASDIHLEPTTDGLKIRYRVDGMLRHIQTLPLEISRKLIVALKVMCDMDIAESRVPQ DGRIGEKYFGGELIKGLDLRVSTLPCVSNTKGDVAEKAVLRLLRQQNSFKTVADLGFSRRSRSKFEGYLNQPQGLVILTG PTGSGKTSTLYTSLVGVATEEVNIITVEDPVEYLLPNITQTQVNEAAGMTFAKSLKAILRQDPDIIMLGEIRDAETVETS IRAALTGHLVLTTLHTNDAIGAIPRLKDLGPDPALISDALLGVVAQRLIRVNCPHCSEPYQPIAADWHQLDLTPKEFASK NWRKGRGCEHCFGSGYLGREAIVELLHVDDAVRQIIYEGSITQLRHYLQQSEFESFRRAAIAKVINGITTVEEICRVLPR SVLQNPQPLLKKRSPTTLINAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-60 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-60 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lepto7376_1204 | YP_007070395.1 | type II secretion system protein E (GspE) | VFG0182 | Protein | 3e-67 | 48 |
| Lepto7376_1204 | YP_007070395.1 | type II secretion system protein E (GspE) | VFG2048 | Protein | 4e-62 | 43 |
| Lepto7376_1204 | YP_007070395.1 | type II secretion system protein E (GspE) | VFG2426 | Protein | 8e-48 | 41 |
| Lepto7376_1204 | YP_007070395.1 | type II secretion system protein E (GspE) | VFG1876 | Protein | 4e-59 | 41 |
