Gene Information

Name : Lepto7376_1023 (Lepto7376_1023)
Accession : YP_007070228.1
Strain : Leptolyngbya sp. PCC 7376
Genome accession: NC_019683
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1148136 - 1148819 bp
Length : 684 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ava:Ava_3453 t

DNA sequence : 
ATGCATATTCTTTATGTCGAAGATGAAATAAAAATTGCGGAATTTGTTCAGGCAGGTCTAAAAGAACAAGGTTTCATGGT
GGACTATTGCGATGATGGCAATGATGGATATGATCGGGCGCTCCACCAAAAATATGACGTAATCGTTTTAGATATTATGG
TGCCGGGAAAGGATGGGCTGGCGATTCTCAAAGGGATTCGGAATGCGGGAAATCAAACGCCTGTTATTTTGCTCACAGCG
CGGAATGAACTAGACGATCGCCTGAGTGGTTTAAATCTCGGGGCGGACGACTATATTGCAAAACCATTTTTTGTGGAAGA
GTTGGTTGCCCGTATCCATGCAGTCATTCGGCGGGTGTCGGGCGATCGCCAAAATATATTGATTGTCGAGCCGTTGAAAT
TAGACCGCTTGGCACGGGAAGTAATGTGCAATGACAAAGCGGTGGAGCTCACCTCGCGGGAATTTAATTTTTTAGAGTAT
TTAATGCGATCGCCGGGGCGAGTATTTACCAGAACACAAATTTTGGAACATGTTTGGGGGTATGACTTTAATCCCAACAC
CAATATTGTGGATGTCTGCGTCCAACGCATCAGAAAAAAACTCGACAAAGTTAATGGCAAAGGTTGCATTGAAAGTGTGC
GGGGCGTCGGATATCGCTTCCGTAAGCCTGAGACTGCCGCTTAA

Protein sequence : 
MHILYVEDEIKIAEFVQAGLKEQGFMVDYCDDGNDGYDRALHQKYDVIVLDIMVPGKDGLAILKGIRNAGNQTPVILLTA
RNELDDRLSGLNLGADDYIAKPFFVEELVARIHAVIRRVSGDRQNILIVEPLKLDRLAREVMCNDKAVELTSREFNFLEY
LMRSPGRVFTRTQILEHVWGYDFNPNTNIVDVCVQRIRKKLDKVNGKGCIESVRGVGYRFRKPETAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-39 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-43 45
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 1e-36 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 1e-36 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 1e-36 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 1e-36 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 1e-36 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 1e-36 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 1e-36 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 1e-36 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-42 44
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 7e-34 43
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator BAC0347 Protein 6e-41 42
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator BAC0083 Protein 6e-43 41
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator BAC0111 Protein 2e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-39 43
Lepto7376_1023 YP_007070228.1 winged helix family two component transcriptional regulator VFG1389 Protein 8e-36 41