Gene Information

Name : Cal7507_0549 (Cal7507_0549)
Accession : YP_007063875.1
Strain : Calothrix sp. PCC 7507
Genome accession: NC_019682
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 581035 - 581757 bp
Length : 723 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: npu:Npun_R6360

DNA sequence : 
ATGCTCAAGAGAGCGAAATGCACCATGAAAATTTTATTAGTTGATGACGAAATTGAATTAACTGATCCCTTAAGTCGCGT
GTTAAACCGTGAAGGTTATAGCGTTGATGCGGCTTACGAAGGAACTAGTGGTAGTCATTTGGCACAATTAGGCAGTTATG
ATTTATTAATTTTAGATTGGATGCTACCAGGAAAAACCGGGTTGGAGATTTGTCAAGAAGTTCGCCGCCAAGGTAAAACT
ACTCCCGTGCTGTTTCTCACTGCTAAAGATACTCTAGATGACCGAGTTCAAGGTTTAGATGCTGGTGCGGATGATTATTT
AATAAAACCTTTTGAACTGAGGGAGTTATTAGCAAGAGTCCGCGCCTTGTTGCGTCGTTCTGGCGTTGAATCTTACACTA
ATTCTACAGGACACCTGACTGTAGCTGATTTGGAACTTGATGGTGAAAACCAAATAGCCTATCGTCAAGGGCGAGTAATT
GAACTCTCGCAAAAAGAAAGCCAGTTGCTGCAATACTTTATGGAACATACTGGACAACTGCTGACTCATGCCCAGATTAT
GCAATATCTGTGGTCTGATGAGGAACAACCGAGTAGTAATGTGATTGCAGCTTTAATTCGCTTGCTGCGACGTAAGATTG
AGGTAGGTAAAGAATCCGCACTGATTCACACTGTTTATGGTAAGGGATATCGCTTTGGTTGTGCCTTTGTGGAATCAGTT
TAG

Protein sequence : 
MLKRAKCTMKILLVDDEIELTDPLSRVLNREGYSVDAAYEGTSGSHLAQLGSYDLLILDWMLPGKTGLEICQEVRRQGKT
TPVLFLTAKDTLDDRVQGLDAGADDYLIKPFELRELLARVRALLRRSGVESYTNSTGHLTVADLELDGENQIAYRQGRVI
ELSQKESQLLQYFMEHTGQLLTHAQIMQYLWSDEEQPSSNVIAALIRLLRRKIEVGKESALIHTVYGKGYRFGCAFVESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator BAC0083 Protein 5e-27 45
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator BAC0197 Protein 9e-29 45
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator BAC0308 Protein 9e-26 44
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator BAC0347 Protein 1e-28 43
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator BAC0288 Protein 8e-32 43
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator BAC0638 Protein 1e-24 43
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator BAC0111 Protein 1e-28 42
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator BAC0125 Protein 1e-29 41
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator CP004022.1.gene3215. Protein 1e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator VFG1390 Protein 8e-29 42
Cal7507_0549 YP_007063875.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-27 41