Gene Information

Name : Cal7507_5362 (Cal7507_5362)
Accession : YP_007068531.1
Strain : Calothrix sp. PCC 7507
Genome accession: NC_019682
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6091139 - 6092512 bp
Length : 1374 bp
Strand : +
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: npu:Npun_R3700 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosyn

DNA sequence :
ATGCGGACAGAATGGGTTGCAAAGCGCCGTGGACACAGCAATGTTTCTCAAATGCACTACGCCCGTCAGGGTGTGATCAC
CGAAGAAATGCACTACGTCGCCCAGCGGGAAAATCTTCCTGCTGATCTCATTCGTGAGGAAGTGGCGCGGGGACGGATGA
TTATCCCTGCGAACATTAATCACACTAACTTAGAACCGATGGCGATCGGCATTGCCTCTAAATGTAAAGTCAATGCTAAT
ATCGGAGCCTCACCCAACTCTTCCAATCTTCAAGAAGAAGTTGATAAGCTCAACTTGGCGGTGAAATACGGTGCTGATAC
CGTGATGGACTTGTCCACAGGTGGCGGTAACTTAGATGAAATTCGCACCGCCATCATCAACGCTTCCCCCGTTCCCATTG
GTACAGTGCCAGTTTACCAAGCTTTAGAAAGTGTCCACGGCACAATTGAAAAGCTTACCCCCGATGACTTTCTGCATATC
ATCGAAAAACACGCCCAACAAGGGGTAGACTATCAAACCATCCACGCCGGGATTTTGATTGAGCATTTACCCTTAGTAAG
AGACCGGATCACTGGTATTGTCTCTCGCGGTGGCGGTATTCTGGCGCGGTGGATGCTACATCACCATAAACAAAACCCAC
TTTACACCCATTTCCGCGACATCGTTGAGATTTTCAAGAGATATGATGTCTCCTTCAGTTTAGGGGATTCCCTGCGCCCT
GGCTGCACCCATGACGCTTCAGATGCCGCCCAATTAGCAGAATTGAAAACCCTCGGACAGCTAACTCGCAAAGCCTGGGA
AGATGACATCCAGGTGATGGTAGAAGGGCCTGGACACGTCCCAATGGATCAAATTGAGTTCAACGTCCGTAAGCAGATGG
AAGAGTGTTCAGAAGCCCCTTTCTATGTTTTAGGGCCATTGGTGACAGATATTGCTCCCGGTTATGACCACATCACCTCA
GCGATCGGCGCAGCGATGGCAGGATGGTACGGTACTGCTATGCTGTGCTACGTTACACCGAAAGAACATTTGGGATTACC
CAACGCCGAAGATGTGCGGAATGGGTTAATTGCTTACAAAATAGCAGCCCATGCAGCAGATATCGCTAGACATCGCCCGG
GTGCGAGAGATAGAGACGATCAACTTTCCGAAGCCCGTTATAATTTCGACTGGAATCGTCAGTTTGAATTATCACTCGAC
CCAGAAAGAGCTAAGGAATATCATGACGAAACTTTACCTGCAGATATTTATAAAACTGCTGAGTTTTGTTCGATGTGTGG
GCCTAAGTTCTGTCCGATGCAAACCAAGGTTGATGCTGATGCTTTGACTGAGTTGGAGAAGTTCTTGGCGAAGGAACCAG
TGGCGCAAGGATAA

Protein sequence :
MRTEWVAKRRGHSNVSQMHYARQGVITEEMHYVAQRENLPADLIREEVARGRMIIPANINHTNLEPMAIGIASKCKVNAN
IGASPNSSNLQEEVDKLNLAVKYGADTVMDLSTGGGNLDEIRTAIINASPVPIGTVPVYQALESVHGTIEKLTPDDFLHI
IEKHAQQGVDYQTIHAGILIEHLPLVRDRITGIVSRGGGILARWMLHHHKQNPLYTHFRDIVEIFKRYDVSFSLGDSLRP
GCTHDASDAAQLAELKTLGQLTRKAWEDDIQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRPGARDRDDQLSEARYNFDWNRQFELSLD
PERAKEYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDADALTELEKFLAKEPVAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 6e-124 61
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 6e-124 61
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 2e-120 56