Gene Information

Name : Cal7507_0405 (Cal7507_0405)
Accession : YP_007063734.1
Strain : Calothrix sp. PCC 7507
Genome accession: NC_019682
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 426755 - 429202 bp
Length : 2448 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR0041

DNA sequence :
ATGTTTGAACACTTCACTTCCGAAGCAATTAAAGTCATTATGCTCGCTCAGGAGGAAGCTCGTCGTCTGGGACACAATTT
TGTAGGAACTGAGCAAATTCTCCTGGGTTTGATGGGAGAAGGAACTGGGGTTGCTGCTAAGGTGCTGTCCGAATTGGGCG
TCACTCTTAAAGATGCGCGTCGGGAAGTCGAAAAAATTATTGGTAGAGGTTCTGGTTTTGTACCACCGGAAATTCCCTTT
ACCCCCAAAGTGAAAAGCCTCTTTGAGCAATCCTTTAAGGAAGCTCACAGCCTGGGACACAACTACATTAATACTGAACA
CGTACTCCTGGGATTGACCGAGGCTGGTGAAGGTGTCGCCGCTAAAGTACTACAAAATCTGGGAGTTGACCTCAAAAGTG
TCCGCAGTGCGGTGATTCGTCGTTTGGGTGACAACCCAAATGTCGCGGCTGGCGGTGGTCAAAGACGCACCCAAACACTG
AGTTTAGAAGAGTTTGGCAGGAATTTGACCAAATTAGCCCAAGAGGGTAGACTCGACCCCGTAGTTGGTCGCGAGAAGGA
AATTGAACGTACTATCCAAATTCTCGGCCGCCGGACGAAGAATAACCCCGTGTTGATTGGGGAGCCAGGCGTTGGTAAAA
CTGCGATCGCAGAAGGTCTAGCTCAACGTATTATCAACCAAGATGTACCCGAAGTTTTGCTAAACAAGCAGGTCATCAGT
CTGGATATGGGTTCTTTAGTCGCAGGAACTCGCTTCCGTGGCGATTTTGAAGAACGCCTGAAGAAAGTCATGGAAGAAAT
CCGCTCTGTCGGAAATATCATCTTGGTAATTGATGAAGTCCACACCCTCGTGGGTGCTGGTGGGACAGAAGGCGGTTTAG
ATGCAGCGAATATCCTCAAACCAGCCTTAGCACGGGGTGAACTCCAGTGTATTGGTGCAACCACCCTCAATGAGTACCGT
CAACACATTGAACGTGATGCAGCCTTAGAGCGTCGTTTCCAGCCAATTTTGGTGGGGGAACCCTCGGTAGCAGAAACAGT
GCAAATTCTCTACGGCTTGCGGAGCGCCTATGAGCAGCACCATAAAGTACATATTTCTGATGCAGCCGTTTTAGCCGCCG
CTGAATTGTCAGACCGCTATATCAGCGATCGCTTTTTGCCAGATAAAGCCATAGACTTAATTGATGAAGCTGGTTCCCGC
GTCCATTTACGCAACTCTCAAATTTCTAGCAATAAAGAACTAAAGCGCGAACTGACTGGTGTCAGCAAATCCAAAGACGA
AGCAGTCAGACTCCAGGATTTCGGCAAAGCTGGTAAGTTACGCAACCAGGAATTACAACTCACTTCTCAACTCCATCCCG
AACTACAAAACGACCAAAATGTCAACATCCCCATCGTCGATGAGGAAGACATCGCCCAAATCGTCGCCTCTTGGACTGGT
GTCCCAGTTAACAAGCTAACTGAATCAGAGTCAGAGTTGCTGTTGCACTTGGAAGACACCCTGCACAAACGACTCATTGG
TCAAGAGCAAGCAGTTACCGCCGTCTCCCGTGCCATCCGCCGCGCTAGAGTTGGGTTAAAGAACCCCAACCGTCCCATCG
CCAGCTTTATCTTCTCTGGTCCCACCGGAGTTGGTAAAACCGAATTAGCCAAAGCCTTAGCCGCTTACTTCTTCGGCGCT
GAAGATTCGATGATTCGCCTGGATATGTCCGAATACATGGAAGGTCACACCGTCTCCAAGCTAATTGGTTCACCTCCAGG
TTATGTCGGATACGATGACGGTGGACAACTAACGGAAGCTGTGCGGCGCAAACCTTACTCAGTGTTGCTATTCGACGAAA
TCGAAAAAGCGCACCCCGATGTATTTAATATGCTGCTGCAACTGTTAGATGACGGTCATCTCACGGATGCTAAAGGTCGC
AAGGTAGACTTCAAGAACACCCTGATAATTTTGACTTCCAACATTGGTTCTAAGGTGATTGAAAAAGGCGGCGGCGGCTT
AGGTTTTGACTTCGATAATCAAGCCGATGCTAGTTACAACCGCATCCGCACCTTGGTAAATGAAGAACTCAAAGCTTACT
TCCGTCCTGAGTTCCTCAACCGTCTGGATGACATCATAGTCTTCACCCAACTTTCTAAGGATGAAGTCAAGCAGATTTCG
GAAATCTTGTTACGTGAAGTTTCTAGCCGCTTGACAGAAAGGGGAATTACCTTAGAAGTTACAGAACGCTTCAAAGAACG
TGTAGTTCAAGAGGGCTATAACCCCAGCTACGGCGCTAGACCTTTACGCCGAGCCATTATGCGCCTCTTAGAAGATTCCC
TCGCCGAAGCCTTGCTAGCTGGTCAAATTACAAATGGTGACACAGCTATTGTGGATGTGGATGATGACGGTCAGGTGAGA
GTAGAAAAGTCAGAAAGGCGCGAGTTACTTTTGGCGAATGTTGGCTAA

Protein sequence :
MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLSELGVTLKDARREVEKIIGRGSGFVPPEIPF
TPKVKSLFEQSFKEAHSLGHNYINTEHVLLGLTEAGEGVAAKVLQNLGVDLKSVRSAVIRRLGDNPNVAAGGGQRRTQTL
SLEEFGRNLTKLAQEGRLDPVVGREKEIERTIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPEVLLNKQVIS
LDMGSLVAGTRFRGDFEERLKKVMEEIRSVGNIILVIDEVHTLVGAGGTEGGLDAANILKPALARGELQCIGATTLNEYR
QHIERDAALERRFQPILVGEPSVAETVQILYGLRSAYEQHHKVHISDAAVLAAAELSDRYISDRFLPDKAIDLIDEAGSR
VHLRNSQISSNKELKRELTGVSKSKDEAVRLQDFGKAGKLRNQELQLTSQLHPELQNDQNVNIPIVDEEDIAQIVASWTG
VPVNKLTESESELLLHLEDTLHKRLIGQEQAVTAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGA
EDSMIRLDMSEYMEGHTVSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVLLFDEIEKAHPDVFNMLLQLLDDGHLTDAKGR
KVDFKNTLIILTSNIGSKVIEKGGGGLGFDFDNQADASYNRIRTLVNEELKAYFRPEFLNRLDDIIVFTQLSKDEVKQIS
EILLREVSSRLTERGITLEVTERFKERVVQEGYNPSYGARPLRRAIMRLLEDSLAEALLAGQITNGDTAIVDVDDDGQVR
VEKSERRELLLANVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_0405 YP_007063734.1 ATPase VFG0079 Protein 0.0 57
Cal7507_0405 YP_007063734.1 ATPase VFG0080 Protein 9e-156 54