|
Name : Cal7507_2901 (Cal7507_2901) Accession : YP_007066150.1 Strain : Calothrix sp. PCC 7507 Genome accession: NC_019682 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3301891 - 3303576 bp Length : 1686 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IP DNA sequence : ATGTCGGAAGAAGATATCCGTGCCGCTAGGCTAGAAAAAGTAGAACAAATCAAGCAGCTAGGTTTTAATCCCTATGCCTA TCGTTGGGAATCAACCCACCACGCAGCGCAATTACAAGCAAAGTTTGTCGATTTACCCAGCGGTGAAGAGAATGATCTAG AAGTAGCGATCGCTGGACGTATCATCGCACGTCGTGTTTTTGGTAAACTGGCTTTCTTCACTTTGCAAGATGAAACTGGT TTAATTCAGCTTTATCTAGAAAAAAATCGCATCCAGGAAGGCATGGCAGATATTGATGCTGATGCCTTTAACCATATTAA ACAACTCACAGATGCCGGTGACATTCTGGGAGTTAAAGGTACTATTAAACGGACTGAAAAGGGCGAGTTATCAGTTTATG TTAAACAATACAGCATCCTCACCAAATCTCTATTGCCCCTACCCGACAAATGGCATGGCTTGACGGATGTTGCTAAACGC TACCGCCAACGCTACGTTGACTTAATTGTCAACCCAGAAGTGCGACAAACCTTCCGTCGTCGTGCCCAAATTACGGCGGG GATTCGTCGCTATTTAGAACAGCGAGATTTCCTCGAAATTGAAACACCTGTTTTGCAAAGTGAAGCTGGCGGTGCGGAAG CACGTCCATTCGTCACTTATCACAACACCTTAGACATGGAGTTATATCTGCGAATTGCTACAGAACTTCATCTCAAGCGC CTCATTGTCGGTGGTTTTGAAAAGGTGTTTGAATTAGGACGAATTTTCCGCAACGAGGGAATTTCGACTCGACACAACCC CGAATTTACAACGATTGAAATTTACCAAGCCTACGCCGATTACAACGATATGATGGCGCTGACAGAAGGGATTATTACCA CTGTTGCCCAAGAGGTAATCGGCACATTAGAAATTACCTACCAAGGGGAAAATTTGGATTTGACACCTCCTTGGCGACGA GCAACCATGCACGATTTGGTGAAGGAATATGCAGGCTTAGATTTCCATTCTTTCCAAACATTAGAAGCAGCAAAAACAGC AAGTAAAAATGCTGGAATTGCCGATGTAGATGCAGTTGAATCTATAGGAAAATTACTAAATTTAGCCTTTGAAGAAAAGG TAGAAACTAAATTAATCCAACCTACCTTTGTCATTGATTATCCTGTAGAAATTTCACCCTTATCAAAACCTCACCGTTCT AAGCCCGGTTTAGTGGAACGATTCGAGTTATTTGTCGTGGGCAGAGAAACTGCTAATAGCTTCTCAGAACTGACTGATCC TATTGAGCAAAGAGAACGTTTAGAAGCTCAAGCTGCTAAGAAAGCCGCAGGTGATTTAGAAGCCCAAGGCGTAGACGAAG ACTTTTTGACAGCCTTGGAATATGGTATGCCACCTACAGGTGGTTTAGGGATTGGGATTGATCGTTTGGTGATGTTCTTA ACCGATGCTGCAAGTATTCGGGATGTAATTGCCTTCCCTCTCCTCAAACCTGAAGGCAGTGTTATTAAGCAGTTTAGCTA TGAGCCAAAAACTCAAACACTGACTATTGAATTTGATAGTGGAAGTGTTTATGAGTATTTCAAAGTACCTCCCAGCGTCA AGGAAGATTTAGAAAATGCACCATCTAAAGGTCAATATTTTAACAAGTTGATTAAAGGAAAATTTAAGTTTGAACAATTG AGTTAG Protein sequence : MSEEDIRAARLEKVEQIKQLGFNPYAYRWESTHHAAQLQAKFVDLPSGEENDLEVAIAGRIIARRVFGKLAFFTLQDETG LIQLYLEKNRIQEGMADIDADAFNHIKQLTDAGDILGVKGTIKRTEKGELSVYVKQYSILTKSLLPLPDKWHGLTDVAKR YRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSEAGGAEARPFVTYHNTLDMELYLRIATELHLKR LIVGGFEKVFELGRIFRNEGISTRHNPEFTTIEIYQAYADYNDMMALTEGIITTVAQEVIGTLEITYQGENLDLTPPWRR ATMHDLVKEYAGLDFHSFQTLEAAKTASKNAGIADVDAVESIGKLLNLAFEEKVETKLIQPTFVIDYPVEISPLSKPHRS KPGLVERFELFVVGRETANSFSELTDPIEQRERLEAQAAKKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMFL TDAASIRDVIAFPLLKPEGSVIKQFSYEPKTQTLTIEFDSGSVYEYFKVPPSVKEDLENAPSKGQYFNKLIKGKFKFEQL S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-106 | 47 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-84 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cal7507_2901 | YP_007066150.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-107 | 47 |
