Gene Information

Name : Cal7507_2550 (Cal7507_2550)
Accession : YP_007065808.1
Strain : Calothrix sp. PCC 7507
Genome accession: NC_019682
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2877690 - 2880158 bp
Length : 2469 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCCATTAAGGTAATCATGCTGGCCCAAGAAGAGGCCCGCCGTTTAGGTCACAATTT
CGTCGGCACTGAACAGATCCTCCTGGGTCTGATTGGTGAAGGGACGGGAGTTGCGGCCAAAGTTCTAAAATCAATGGGTG
TCAATCTCAAAGACGCCCGAATTGAGGTAGAAAAAATCATAGGCCGAGGTTCTGGTTTTGTCGCCGTGGAAATTCCGTTT
ACCCCACGGGCAAAGCGAGTTCTGGAACTATCTTTAGAAGAAGCGCGCCAATTAGGCCATAACTACATTGGCACCGAGCA
TCTGCTGTTGGGACTGATCCGAGAAGGAGAAGGTGTCGCAGCCAGAGTCCTAGAAAACCTCGGCGTGGATCTATCTAAGG
TAAGAACCCAGGTCATCCGAATGCTGGGAGAAACAGCAGAGGTTTCCGCGACCGGGCAATCAGGACGCACCAAAACTCCT
ACCTTGGATGAATTTGGTTCCAACCTGACCCAAATGGCAACGGATAACAAACTCGATCCTGTGGTGGGACGCGCCAAAGA
AATCGAGCGAGTGATACAGATTTTGGGTCGCCGGACAAAAAATAACCCAGTGCTGATTGGCGAACCAGGGGTTGGTAAAA
CAGCGATCGCTGAAGGTTTAGCGTCGCGCATTGCCAACAAAGATGTCCCCGACATCCTGGAAGATAAGCGCGTAGTCACC
CTCGATATCGGCTTGCTCGTAGCAGGCACCAAGTACCGGGGTGAATTTGAAGAACGTCTGAAGAAAATCATGGATGAGAT
CCGCTCTGCGGGTAACGTGATTCTCGTGATTGACGAAGTCCACACCCTCATTGGTGCAGGTGCTGCAGAAGGCGCAATTG
ATGCAGCGAATATCCTCAAGCCAGCCTTGGCTAGAGGTGAATTGCAATGTATCGGCGCGACAACCCTGGATGAATACCGC
AAGCACATCGAGCGAGATGCAGCCTTAGAGCGCCGCTTCCAACCAGTAATGGTAGGTGAGCCGACAGTCGATGAAACAAT
TGAGATTTTACATGGATTGCGCGAGCGTTACGAGCAACACCATAAACTGAAAATCTCTGACGAAGCATTGATAGCGGCGG
CGAAATTATCTGACCGTTACATTAGCGATCGCTATCTCCCAGACAAAGCCATCGACTTAATCGATGAAGCTGGTTCTCGC
GTCCGCTTAATTAACTCCCAACTGCCTCCTGCAGCTAAAGAGTTAGACAAAGAACTGCGGCAAATCTTGAAAGAGAAAGA
TGATGCAGTTCGTTCCCAAGACTTTGACAAAGCTGGGGAACTGCGTGATCGCGAAATGGAAATCAAAGCCGAAATCCGGG
CGATCGCTCAAAGCAAAACCAACGGTGCTAGCGGTGACGGAGTGGAACCCGTAGTCACCGAAGAGGATATTGCCCATATT
GTTGCTTCCTGGACTGGTGTACCGGTGAACAAGCTCACCGAATCAGAATCCGAGAAGTTACTGCACATGGAAGACACCTT
ACACCAGCGTCTCATTGGACAAGAAGACGCAGTCAAGGCAGTTTCCCGGGCAATTCGTCGCGCTCGTGTTGGATTGAAAA
ATCCCAACCGACCCATCGCCAGCTTTGTCTTCTCCGGGCCAACCGGCGTTGGTAAAACTGAATTAGCGAAATCCTTGGCG
TCTTACTTCTTCGGTTCCGAAGAAGCAATGATCCGTTTGGATATGTCGGAATATATGGAGCGCCACACCGTCAGCAAATT
GATTGGTTCGCCTCCTGGTTATGTTGGTTATAACGAAGGTGGTCAGTTAACCGAAGCCGTGCGGCGGCGTCCTTACACCG
TGGTGCTGTTCGACGAAATCGAAAAAGCGCACCCCGATGTCTTCAACATGCTGCTGCAAATTTTGGAAGACGGACGGTTA
ACCGATGCTAAAGGTCGCACCGTTGACTTCAAAAACACCTTGCTGATTTTGACATCCAACATTGGTTCTAAGGTGATTGA
AAAAGGCGGCGGCGGTATTGGCTTTGAATTTGGCGAAGACCAAAGCGAATCCCAGTACAACCGGATTAAAACCCTGGTGA
ACGAAGAACTGAAGCAATACTTCCGTCCAGAGTTCCTCAATCGACTAGATGAGATTATCGTCTTCCGTCAGTTGAGCAAG
GTCGAAGTCACCCAAATCGCCGAAATCATGCTCAAAGAAGTATTTGGTCGCCTGACCGAAAAGGGTATCACCCTAGAAGT
CACCGATCGCTTCAAAGAGCGCCTGATCACCGAAGGTTACAGTCCTAGCTATGGAGCAAGACCGTTACGTCGGGCGATTA
TGCGGTTGTTAGAAGATAGCCTAGCAGAAGAGATTCTGTCTGGTCGCATAAAAGACGGTGATATTGCGATCGTTGATGTT
GATGAAAACGGCATTGTACAAGTTAGTTCTCAACAGCGTCGGGAATTATTACCCCAAGGTGTTGAGTAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGQSGRTKTP
TLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVMVGEPTVDETIEILHGLRERYEQHHKLKISDEALIAAAKLSDRYISDRYLPDKAIDLIDEAGSR
VRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDKAGELRDREMEIKAEIRAIAQSKTNGASGDGVEPVVTEEDIAHI
VASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLA
SYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRL
TDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFGEDQSESQYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQLSK
VEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKERLITEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKDGDIAIVDV
DENGIVQVSSQQRRELLPQGVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_2550 YP_007065808.1 ATPase VFG0079 Protein 0.0 60
Cal7507_2550 YP_007065808.1 ATPase VFG0080 Protein 1e-154 52