Gene Information

Name : Cal7507_1780 (Cal7507_1780)
Accession : YP_007065070.1
Strain : Calothrix sp. PCC 7507
Genome accession: NC_019682
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1945621 - 1948236 bp
Length : 2616 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCCACTAATCAAAACCAATTTACAGAAAAAGCCTGGGAAGCGATCGCCCATACCCCGGATATTGTTAAACAATA
TCAACAACAACAGATAGAAAGCGAACACTTGCTGAAAGCACTGCTAGAACAAGAAGGTCTAGCCATTGCGATTCTTACCA
AAGCAGGTGCGAATATCCAAAAAGTGCGCGATCGCACTGAACAATTCCTCCAACGTCAGCCAAAAGTATCAGGTAGCAGC
ACCTCCGTATATTGGGGACGCAGTGCAGATACACTATTAGATCGGGCCGACGGATATCGTAAAGATTTCCAGGACGAGTA
TATTTCAGTTGAGCATATATTCCTTGCCTACGCCAAAGACGATCGCTTTGGTAAAGGTTTACTCCAAGAATTCGGTTTAA
ACGAAGCCAAACTAAAAGATATTATTAAACAAGTTCGAGGAAGCCAGAAAGTGACGGATCAAAATCCAGAAGGTAAATAC
GAAGCACTGGAAAAATATGGGCGTGACCTCACAGAAGCTGCCAGTAAAGGACAACTTGATCCGGTAATTGGGCGTGATGA
TGAGATTCGTCGCACCATCCAGATTCTCTCTCGCCGCACTAAGAATAACCCAGTGTTAATTGGCGAACCAGGTGTAGGTA
AAACGGCGATCGCCGAAGGACTAGCACAGCGCATCATTGCTGGTGATGTACCTAAATCCCTCGAAAACCGCAAGCTAATC
GCCCTCGATATGGGTGCTTTGATTGCTGGGGCAAAATTCCGGGGCGAATTTGAAGAACGCCTCAAAGCAGTATTAAAAGA
AGTTACGGAATCTCGCGGCAATATAGTTTTATTTATTGATGAAATTCATACCGTTGTTGGTGCTGGTGCGACTCAAGGCG
CGATGGATGCCGGTAATTTGTTAAAACCAATGTTGGCGCGGGGTGAATTGCGGTGTATTGGGGCGACAACTTTAGATGAA
TACCGTAAGTATATTGAAAAAGATGCTGCCTTAGAAAGACGTTTCCAGCAAGTTTATGTAGATCAGCCCAATGTGGAAGA
TACTATTTCCATTTTGCGCGGGTTGAGAGAACGTTATGAAACCCACCACGATGTGACAATTTCTGATAGTGCTTTAGTTG
CAGCTGCGACATTATCTAGTCGTTATATCTCTGACCGCTTCCTCCCTGATAAAGCCATCGATTTGGTAGACGAAGCCGCC
GCCAGATTAAAAATGGAGATTACCTCCAAACCAGAAGAACTCGACGAAATCGATCGCAAGATTTTGCAGTTGCAAATGGA
AAGGTTGTCCCTGCAGAAAGAAAGCGATATAGCTTCCCGGGAACGTCTAGAAAGACTAGAAAAAGAAATTGCTGATCTCC
AAGAAGAACAAAGAACGCTAAACGCTCAATGGGAATCTGAAAAAGGTATTATTGACAAAATTTCATCAGTTAAAAAAGAG
CTTGAACGTGTTAATCAAGAAATTCAGCAAGCAGAACGTAACTACGAACTTGAAAAGGCTGCGAAGCTAAAATACACTAC
GTTAATCGATTTGCATCGTCAATTAGAAGCCGTAGAAAATGAATTGGCAGCCGTTCAAAGAAATGGTAAATCATTATTGC
GTAAGGAAGTCACAGAGTCTGACATTGCTGAAGTTATTTCTAAGTGGACAGGGATACCAATTAGCAAGTTGGTGGAATCA
GAAAAAGAGAAACTGCTGCATTTAGAAGATGAACTACACCACCGCGTAGTGGGACAATCTGAAGCAGTCACAGCAGTAGC
CGATGCAATTCAGCGATCGCGTGCTGGACTTGCAGATCCCAACCGTCCCATCGCTAGCTTTATTTTCCTGGGGCCTACTG
GTGTAGGTAAAACTGAGTTAGCGAAAGCACTGGCGGCTTATATGTTCGACACTGAAGATGCGCTAGTGCGAATCGATATG
TCTGAATATATGGAGAAACACGCAGTTTCTCGACTCATTGGTGCGCCTCCAGGATATGTGGGTTACGAAGAAGGCGGACA
ACTCACAGAAGCGATTCGCCGCCGTCCTTATGCAGTCATTCTCTTCGATGAAATTGAGAAAGCCCACCCCGATGTCTTTA
ATATCTTCCTGCAAATTCTTGATGATGGTCGCGTCACCGATGCCCAAGGTCATAAGGTAGACTTCAAAAATGCCATCATC
ATCATGACCAGTAACATCGGTTCTCAATACATTCTCGATGTCGCTGGCGATGACTCCAGTTATGACGAAATGCAGCATCG
GGTGATGGAAGCGATGCGAAATAGCTTCCGTCCAGAATTCCTCAACCGCATCGATGAAATCATTATCTTCCATACTTTGC
AAAAACAAGAACTGCGGCGGATTGTACTTTTACAAGTAGATCGACTGAGGAAAAGACTCACGGATCGCAAAATGTCCCTC
AAGCTTTCTGATTCTGCACTTGACTTTTTAGCTGAAGTAGGTTATGACCCAGTTTTTGGAGCGCGTCCACTCAAGCGGGC
AATTCAGCGCGAGTTAGAAACTCAAATTGCTAAAGCCATCTTACGCGGCGACTTCAACGACGGCGACACCATTTTTGTTG
ATGTGCAAAATGAGCGTCTTTCTTTTAGTCGTTTACCTGTTGAGGTGTTTAGCTAA

Protein sequence :
MQPTNQNQFTEKAWEAIAHTPDIVKQYQQQQIESEHLLKALLEQEGLAIAILTKAGANIQKVRDRTEQFLQRQPKVSGSS
TSVYWGRSADTLLDRADGYRKDFQDEYISVEHIFLAYAKDDRFGKGLLQEFGLNEAKLKDIIKQVRGSQKVTDQNPEGKY
EALEKYGRDLTEAASKGQLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPKSLENRKLI
ALDMGALIAGAKFRGEFEERLKAVLKEVTESRGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYVDQPNVEDTISILRGLRERYETHHDVTISDSALVAAATLSSRYISDRFLPDKAIDLVDEAA
ARLKMEITSKPEELDEIDRKILQLQMERLSLQKESDIASRERLERLEKEIADLQEEQRTLNAQWESEKGIIDKISSVKKE
LERVNQEIQQAERNYELEKAAKLKYTTLIDLHRQLEAVENELAAVQRNGKSLLRKEVTESDIAEVISKWTGIPISKLVES
EKEKLLHLEDELHHRVVGQSEAVTAVADAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYMFDTEDALVRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHKVDFKNAII
IMTSNIGSQYILDVAGDDSSYDEMQHRVMEAMRNSFRPEFLNRIDEIIIFHTLQKQELRRIVLLQVDRLRKRLTDRKMSL
KLSDSALDFLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGDFNDGDTIFVDVQNERLSFSRLPVEVFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-103 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 9e-105 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 7e-105 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_1780 YP_007065070.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-111 43
Cal7507_1780 YP_007065070.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-115 42