Gene Information

Name : Cal7507_1776 (Cal7507_1776)
Accession : YP_007065066.1
Strain : Calothrix sp. PCC 7507
Genome accession: NC_019682
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1941477 - 1942175 bp
Length : 699 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ava:Ava_3453 t

DNA sequence : 
GTGAACATTCTGTTTGTCGAAGATGAAGCAAAGATTGCTAACTTTGTCCGGGCTGGATTGAAGGAGCAAGGGTTTGTCGT
AGACTACTGTGATAACGGTGATGAGGGATATCTGCGGGCATTAGACAATGAATATGACGCGATCGTCCTTGATATTATGG
TGCCGGGAAAAGATGGATTATCGATTCTCAAACAACTGCGACGATCAGGGCGGAATACTCCCGTGATTTTGTTAACGGCT
CGCAATGAACTAGACGATCGCCTGGAAGGGTTAAACTTGGGAGCCGATGACTATATTGCCAAACCGTTTTTCGTCGAAGA
ATTAGCAGCGCGAATTCACGCTGTAGTCAGACGGAGTGTAGGCGATGTCTACGACGGGCTACGCCTACGCCAAAATGCGC
TCAGTGTTGGCCCACTGAAGCTGGATCGAATCACGCGGGAAGTTACTTGTGATGGACAGATTGTCGAACTTACCACACGT
GAATTCAATTTGCTGGAATACTTAATGCGATCGCCTGGCAGAGTTTTTACCCGCACCCAAATCTTAGAACATGTGTGGGG
CTATGATTTCAATCCTAATACCAATATCGTTGATGTGTGTATTCAAAGGATTCGCAAAAAGATTGACTCAATTACTGGTT
TAAGTTGGATTGAAAGCGTCCGGGGAGTTGGTTATCGTTTTCGTAATTCGCAATCATGA

Protein sequence : 
MNILFVEDEAKIANFVRAGLKEQGFVVDYCDNGDEGYLRALDNEYDAIVLDIMVPGKDGLSILKQLRRSGRNTPVILLTA
RNELDDRLEGLNLGADDYIAKPFFVEELAARIHAVVRRSVGDVYDGLRLRQNALSVGPLKLDRITREVTCDGQIVELTTR
EFNLLEYLMRSPGRVFTRTQILEHVWGYDFNPNTNIVDVCIQRIRKKIDSITGLSWIESVRGVGYRFRNSQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-38 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator BAC0197 Protein 3e-43 45
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator BAC0125 Protein 3e-40 44
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator BAC0347 Protein 3e-41 42
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 3e-34 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 3e-34 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 3e-34 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 3e-34 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 1e-32 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 3e-34 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 3e-34 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 3e-34 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 3e-34 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator BAC0111 Protein 6e-44 41
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator BAC0083 Protein 6e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator VFG1389 Protein 3e-35 43
Cal7507_1776 YP_007065066.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-38 42