Gene Information

Name : Cal7507_0996 (Cal7507_0996)
Accession : YP_007064308.1
Strain : Calothrix sp. PCC 7507
Genome accession: NC_019682
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1065776 - 1066519 bp
Length : 744 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: npu:Npun_F3659

DNA sequence : 
ATGCCGAGGATTCTTGTCATAGACGATGACCCAGCAATTTCAGAACTCGTTGCCGTCAACTTGGAAATGGCTGGCTACGA
TGTTAGTCAAGCAGAAGACGGGATAAAAGGTCAGGCGCTGGCTCTCCAGCTACAACCAGACTTAATCATGCTCGACCTCA
TGTTGCCTAGGGTAGACGGGTTCACCGTTTGTCAACGGCTGCGTCGGGATGAGCGCACATCTGAAATTCCCGTTTTGATG
TTGACGGCTTTAAGCCAAACGCAAGACAAAGTGGAAGGCTTCAATGCTGGCGCAGATGACTACCTCACCAAGCCCTTTGA
AGTCGAAGAATTGCTAGCGCGGGTGCGAGCATTACTGCGGCGAACGGACCGCATTCCCCAAGCAGCAAAGCACAGTGAGA
TTCTGAATTATGGCTCACTCACCCTCGTTCCCGAAAGATTTGAAGCCATCTGGTTTAATGAAACGGTGAAACTGACTCAC
TTGGAGTTTGAGCTACTCCACTGCTTACTCCAGCGCCACGGACAGACAGTTTCTCCTAGCGAAATCCTCCGAGAAGTTTG
GGGCTACGATCCAGATGATGACATTGAAACCATTCGAGTACACATCCGCCATCTGAGAACCAAGCTAGAACCAGATCCCC
GCCACCCCCGTTACATCAAGACAGTATACGGCGCGGGATACTGTCTCGAGTTACCTAGCTTACCTCCATCACATGAAGGA
GCTTCAACATCGGTTGTAGAGTAG

Protein sequence : 
MPRILVIDDDPAISELVAVNLEMAGYDVSQAEDGIKGQALALQLQPDLIMLDLMLPRVDGFTVCQRLRRDERTSEIPVLM
LTALSQTQDKVEGFNAGADDYLTKPFEVEELLARVRALLRRTDRIPQAAKHSEILNYGSLTLVPERFEAIWFNETVKLTH
LEFELLHCLLQRHGQTVSPSEILREVWGYDPDDDIETIRVHIRHLRTKLEPDPRHPRYIKTVYGAGYCLELPSLPPSHEG
ASTSVVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 7e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 8e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 9e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 6e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 8e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 8e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 8e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 8e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 8e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 8e-35 44
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 2e-33 43
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator CP004022.1.gene3215. Protein 8e-20 42
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 5e-36 42
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 1e-11 42
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator BAC0125 Protein 3e-26 41
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator BAC0308 Protein 6e-21 41
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-29 43
Cal7507_0996 YP_007064308.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-21 41