|
Name : Syn6312_0891 (Syn6312_0891) Accession : YP_007060642.1 Strain : Synechococcus sp. PCC 6312 Genome accession: NC_019680 Putative virulence/resistance : Unknown Product : type I restriction-modification system methyltransferase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 875746 - 877314 bp Length : 1569 bp Strand : - Note : PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM) DNA sequence : ATGCCTCGTTCTGCTGTTACCCCTACCCCTGCTGGAGCTAACCTCGGTTACGAAGCGGAGCTATTCAAAGCAGCGGACAA ACTGAGAGGCAACATGGAGCCATCAGACTATAAGCACGTTGTCTTGGGGCTGATTTTTCTGAAGCACATCTCAGATCGGT TTGAGGCAAAGCAGCAGGAACTGGCCGCAGAATTCCCCGATGATCCCGAAATTCTAGAGGACAAGGACGAATACACCGCC GAGAACGTCTTTTGGGTGCCGAAAGAGTCCCGCTGGTCTTATCTCCAGGCCAATGCCAAGCAACCAACTATCGGGAAGTT AATTGATGAAGCCATGCTGGGCCTGGAGAAGGTTAACGATTCGCTCAAGGGGGTGTTACCCAAAGAATATGCCAGGCCAG CGTTAAATGCTGTCATGTTGGGCGAACTGATTGACCTGATTTCCAATATTGCCTTTGGGACTAGCCACGATAATGCCAGG GATGTGTTGGGGCGAGTCTATGAATATTTCCTAGGTCAATTTGCCGGGTCAGAGGGTAAGCGTGGCGGTGAATTTTATAC CCCCCGGTCAGTGGTGCGGGTGATGGTGGAAATGCTGCAACCCTACCAAGGGCGTGTCTATGACCCCTGTTGTGGCTCCG GTGGGATGTTTGTTCAGTCGGAAAAGTTTGTCGAAGATCACGCCGGGCGGATTGGTGATATTGCTATTTACGGTCAAGAA AGCAATTACACCACTTGGCGGTTATGCAAGATGAACTTGGCCGTGCGGGGGATTGATTCGGATATTCGCTGGAACTCTGA AGGAACCTTTCATAAAAACGAGTTGCCAGATTTGCGAGCCAATTTTATTCTGGCGAATCCACCGTTTAATATCTCGGATT GGGGTGGGGATCGGATTCGAGAGGATGCCCGCTGGAAGTTTGGGATTCCGCCCGTAGGCAATGCCAACTATGCCTGGTTA CAACATATTTGGCACCATCTGGCTCCGACAGGAACAGCGGGGGTGGTCTTAGCCAATGGCTCCATGTCATCGCAACAGAG TGGGGAAGGGGACATTCGCCAGGCCATGATTGAGGGAGATGCGATTGACTGCATGATTGCCTTACCAGGCCAGCTTTTTT ATTCCACCCAGATTCCGGCCTGTTTATGGTTTTTGGCCAAGGATAAGTCCAACGGCATTGCCCGAGATAAAAAACTAAGA GACCGGCGTGGCGAGATTCTGTTTATTGATGCTCGGAAGTTGGGCTACATGGTGGACAGAACCCGGCGAGAGTTCAGTGA TGAAGATGTGGCTAAAATTGCAGAAACTTACCATTGCTGGCGGGAAGGGGCAGGCTATGAGGATATACCGGGATTTTGCA AGTCTGCCAATTTAGAGGAAATCCGGGGGCATGGCTACGTTTTAACCCCAGGCCGGTATGTGGGAGCCGCCGCCGCCGAG GAAGACGACACCCCCTTTGCCGAAGTCATGCAGCAACTCACAACCAAGCTGGGGCAACAGTTCCAAGAGTCAGCCCGTTT AGAATCCGTGATTCGGGAAAATTTGCAGGGTCTGGGGTATGACTTTTGA Protein sequence : MPRSAVTPTPAGANLGYEAELFKAADKLRGNMEPSDYKHVVLGLIFLKHISDRFEAKQQELAAEFPDDPEILEDKDEYTA ENVFWVPKESRWSYLQANAKQPTIGKLIDEAMLGLEKVNDSLKGVLPKEYARPALNAVMLGELIDLISNIAFGTSHDNAR DVLGRVYEYFLGQFAGSEGKRGGEFYTPRSVVRVMVEMLQPYQGRVYDPCCGSGGMFVQSEKFVEDHAGRIGDIAIYGQE SNYTTWRLCKMNLAVRGIDSDIRWNSEGTFHKNELPDLRANFILANPPFNISDWGGDRIREDARWKFGIPPVGNANYAWL QHIWHHLAPTGTAGVVLANGSMSSQQSGEGDIRQAMIEGDAIDCMIALPGQLFYSTQIPACLWFLAKDKSNGIARDKKLR DRRGEILFIDARKLGYMVDRTRREFSDEDVAKIAETYHCWREGAGYEDIPGFCKSANLEEIRGHGYVLTPGRYVGAAAAE EDDTPFAEVMQQLTTKLGQQFQESARLESVIRENLQGLGYDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-154 | 59 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 9e-154 | 59 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-153 | 58 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-126 | 49 |
