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Name : Syn6312_0882 (Syn6312_0882) Accession : YP_007060633.1 Strain : Synechococcus sp. PCC 6312 Genome accession: NC_019680 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : - Position : 868743 - 871883 bp Length : 3141 bp Strand : - Note : PFAM: Domain of unknown function (DUF3387); Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family DNA sequence : ATGAGTTTTGTTACCGAAGACGACATTGAACAGGTACTCATCGAGCAACTGCAACACCTCGGTTATCATTACCTGCCCGA TAGTGTTGCTAACCCCGATGGCACAGCCCCCGAGCGGGAATCCTATGCCGATGTCATTCTGCCTCAACGGTTGCGGGATG CCCTAGATCGCCTAAACCCTACCATTCCCGCCACTGCCCGCGATGATGCCTTCAAAAAACTAATTGCCACCGAAAAGCCC AACCTCATCGAAGAAAACCGCCGTCTGCATCAACTCCTCATCGAAGGCATTGATGTTGAGTTCTACAGTGACGATGGCAC CATTCGCGGCGATAAAGTGTATGCCATTGACTTTGCCCAGCCTGAACAAAACGACTGGTTAGTGCTAAACCAATTTACCG TCATCGAAGCAGGCCAGAACCGCCGCTCAGATGTCGTGGTCTTTGTGAATGGCTTGCCCCTGGCAGTGATTGAAATTAAA AATCCTGGCACCGAAACCGCCACCCTCGCCGCCGCCTATAACCAACTGCAAACCTACAAAGCCCAAATTAGCTCCCTGTT CAGAACCAACGCCGTTCTGGTCACAACCGATGGCCTCATGGCTCGCATTGGCTCCCTAACCGCAGACTTAGAACGGTTCA TGCCCTGGCGTACCACGGATGGCGAAACCATTGCCCCCAAAGGCACACCGGAAATGTCCACCTTAGTCGAAGGGGTATTT ACCAAACGCCACCTCCTGAACCTGATCCAAAATTTCACCGTCTTTGGCGACGATGGCACAGGCATTACCAAAATCATTGC GGGCTATCACCAATTCCACGGTGTCCAGAAAGCCATCGCCAAAACCATAGCCGCTACCCATCAAACCGGAGATCGCAAAG CGGGGGTCATCTGGCATACCCAAGGGTCAGGCAAAAGTTTACTGATGGCCTTCTATGTGGGGCAACTGGTTCGCCGTCCT GAGCTAGAAAACCCCACCATTGTCGTGATTACAGATCGCAATGATCTAGACGATCAACTCTTTGCCACCTTTGCCATGTG CCGGGATTTGATTCGCCAAACACCCCAACAGGCCAATAGCCGGGAAGACCTGCAAACCCTTCTTAATCAGGTATCCGGCG GCGTCATCTTTACCACAATCCAAAAATTCGCTCCCCCCACTGGAGAAACCCGCTACCCCGTTTTAACCGAGCGGCGCAAC GTCATCGTCATCGCAGATGAAGCCCACAGAAGCCAGTATGGATTTAAGGCCAAAGTGGATCAAAAAAGTGGGGTGATTGC CTATGGCTTTGCCAAATATTTGCGGGATGCCCTACCCCATGCCTCCTTTATTGGCTTTACTGGAACCCCCATCGAAGCCA GTGATGTGAATACGCCCGCTGTCTTTGGGAACTACATTGATATTTACGACATCAGCCGGGCTGTAGAAGATGGGGCAACC GTGCCAATCTACTATGAAAGCCGTTTAGCCCGGATTGAGCTACCAGAGGATGAAAAACCGAAAATTGATGCCGAAATTGA AGACCTGATTGATGATGAGGATTCAGACCAGGCCCGCCTCAGTCAAAAATGGGCCACCGTGCAAGCCCTCGTCGGAGCCG AAAAACGGTTAAAACAAGTCGCCAGAGATTTAGTCACTCATTTTGAAAACCGAATCACCGCCCTGAAGGGTAAGGCCATG ATCGTTTGCATGAGCCGGGCCATTTGCGTCAAACTCTACAACCATATTATTGAACTGCGACCCGATTGGCACTCAGACGA TGAACAAGCCGGAATCATCAAAATTGTGATGACCGGGGCAGCGTCCGACCCTCCCGAGTGGCAACCCCACATTGGCAATA AAGCTCGCCGGGATTTGATGGCTAAACGGCTGAAAGACCCCACCGACCCCTTGCAACTGGTGATTGTCAGGGATATGTGG CTAACCGGCTTTGATGCCCCGGCCCTGCACACGATGTATGTGGATAAACCGATGAAAGGCCATGGTCTGATGCAAGCCAT TGCCCGTGTGAACCGCGTCTTTCGGGATAAGCCTGCTGGCCTGGTGGTGGACTATATCGGCATTGGTCAACGGTTGCGGG AAGCCCTCCGTGATTATTCAGCCCAAGACCAACGCCAGACCGGGATTGATGAAGCCGAAGCCGTGGCCCTGATGCTGGAA AAATACGATGTTGTCCGGGCTATGTTTCATGGGTTTAATTACCAGCGGGGCCTGGATGGAACACCCCAAGAGCGATTGGT GGTTATGGCTGAGGCGATGGAGTGGATATTAGACCAGCAACACCAAGCTGCCCTCCAAGAAACAGAACCAACCAAGCAAA AACAGGCCCGCCGCCGTTATCAGGATGCAGTCTTAGCTCTCTCCAAAGCCTTTGCTTTAGCCGCCGCCAGTGATGAAGCT CGGTCAATTCGGGATGAAGTGGGACTATTCCAAACCATTCGGGCAGCTTTAGTGAAATCTACAACCGGGCCTGGGCAGTC AGCCGCCGAGCGAGAATTTGCTGTCCAACAAATTATTGATCGGGCTGTAGTCTCTACCGAAATTGTTGATATTCTCAGTG CCGCTGGGCTTTCTTCTCCTGATATTTCTATTCTATCCGATGACTTTTTATTAGAAGTGCGGCAAATGGAGAAAAAAAAC TTGGCGATTGAGGCCTTAAGACGATTACTCAATGATGAAGTTCGCTCCCGCAGTGCCAACAATATTACCCAGCAGAAAAA GTTTTCAGAGCGGTTAGAACAAGCCATCGCCCGGTATCACACCAATGCCCTCAGTACCGTTGAAGTGATCCAAGAGTTAA TTAATCTGGCCCAAGACATCAAAGCAGCCAAAGCACGAGGGGAAAACCAAGGGCTATCAGCGGATGAGTATGCCTTCTAT GACGCTCTAGCCGAAAACCAAAGTGCAGTCGAAGTCATGGGAAATGAACAGTTAAAGATCATCGCCCATGAGTTGCTGGT CAGTTTGAAGTCTAATGTCACGGTTGACTGGGCCCACCGTGAAAGTGCCAGGGCCAGGCTTCGGACAATCGTTAAACGTA TCCTTAAAAAATATGGTTATCCCCCAGATATGCAAGCAATGGCCGTCCAAACTGTCCTCCAACAGGCCGAAGCGCTTTCT GCCCATTGGGACAGAGCTTAA Protein sequence : MSFVTEDDIEQVLIEQLQHLGYHYLPDSVANPDGTAPERESYADVILPQRLRDALDRLNPTIPATARDDAFKKLIATEKP NLIEENRRLHQLLIEGIDVEFYSDDGTIRGDKVYAIDFAQPEQNDWLVLNQFTVIEAGQNRRSDVVVFVNGLPLAVIEIK NPGTETATLAAAYNQLQTYKAQISSLFRTNAVLVTTDGLMARIGSLTADLERFMPWRTTDGETIAPKGTPEMSTLVEGVF TKRHLLNLIQNFTVFGDDGTGITKIIAGYHQFHGVQKAIAKTIAATHQTGDRKAGVIWHTQGSGKSLLMAFYVGQLVRRP ELENPTIVVITDRNDLDDQLFATFAMCRDLIRQTPQQANSREDLQTLLNQVSGGVIFTTIQKFAPPTGETRYPVLTERRN VIVIADEAHRSQYGFKAKVDQKSGVIAYGFAKYLRDALPHASFIGFTGTPIEASDVNTPAVFGNYIDIYDISRAVEDGAT VPIYYESRLARIELPEDEKPKIDAEIEDLIDDEDSDQARLSQKWATVQALVGAEKRLKQVARDLVTHFENRITALKGKAM IVCMSRAICVKLYNHIIELRPDWHSDDEQAGIIKIVMTGAASDPPEWQPHIGNKARRDLMAKRLKDPTDPLQLVIVRDMW LTGFDAPALHTMYVDKPMKGHGLMQAIARVNRVFRDKPAGLVVDYIGIGQRLREALRDYSAQDQRQTGIDEAEAVALMLE KYDVVRAMFHGFNYQRGLDGTPQERLVVMAEAMEWILDQQHQAALQETEPTKQKQARRRYQDAVLALSKAFALAAASDEA RSIRDEVGLFQTIRAALVKSTTGPGQSAAEREFAVQQIIDRAVVSTEIVDILSAAGLSSPDISILSDDFLLEVRQMEKKN LAIEALRRLLNDEVRSRSANNITQQKKFSERLEQAIARYHTNALSTVEVIQELINLAQDIKAAKARGENQGLSADEYAFY DALAENQSAVEVMGNEQLKIIAHELLVSLKSNVTVDWAHRESARARLRTIVKRILKKYGYPPDMQAMAVQTVLQQAEALS AHWDRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 49 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 49 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 49 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 48 |
