Gene Information

Name : Syn6312_0625 (Syn6312_0625)
Accession : YP_007060389.1
Strain : Synechococcus sp. PCC 6312
Genome accession: NC_019680
Putative virulence/resistance : Unknown
Product : RNAse PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 626062 - 626781 bp
Length : 720 bp
Strand : -
Note : PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH

DNA sequence :
ATGACTTGGCAACGACCCGATGGCCGCGACTGGCAGCAACTCCGGCCGGTCAGTTTTCAGCGTAATTTTACTCAATTCAC
CCCTGGTTCCGTTTTGGCCAGTTGTGGGCAAACCAGGGTTTTATGTACAGTTTCCGTCCGACCGGGGGTGCCTAAATTTT
TAGAAGGATCTGGCCAGGGTTGGTTAACGGCAGAATATCGGATGCTACCCAGCGCAACGCCACAACGCCAAGAACGAGAA
TTGTATAAGTTGTCGGGCCGGACTCAAGAAATTCAACGCTTGATTGGGCGAAGTTTACGGGCTGCCTTAGATTTGGGGGG
CCTGGGGGAGCGAACCATCTTAGTGGATGCCGATGTTTTACAGGCCGATGCGGGAACCAGAACCACGGCAATTACGGGCG
GGTATGTGGCCTTAGTGGATGCCTTGTTGCTGCTGATCAATCAAGGAGAACTGTCCCAGTTGCCGATCAAGCATCAAGTG
GCGGCCGTATCCGTGGGCCTGGTGGAAAATCAACCCTGTTTGGATCTCAATTATCCCGAAGACTTAGCCGCAATGGTGGA
TTTTAACGTGGTCATGACTGAACATCTCGAATTATTAGAAGTCCAAGGCACGGCCGAATCCGGTAGCTTTAGCCGTCATC
AACTCAATCAGATGTTGGATTTAGCTGAAATTGGCATCAAGGAATTGCTGGACTTGCAAAACCAGGCCCTGGCCACCTAA

Protein sequence :
MTWQRPDGRDWQQLRPVSFQRNFTQFTPGSVLASCGQTRVLCTVSVRPGVPKFLEGSGQGWLTAEYRMLPSATPQRQERE
LYKLSGRTQEIQRLIGRSLRAALDLGGLGERTILVDADVLQADAGTRTTAITGGYVALVDALLLLINQGELSQLPIKHQV
AAVSVGLVENQPCLDLNYPEDLAAMVDFNVVMTEHLELLEVQGTAESGSFSRHQLNQMLDLAEIGIKELLDLQNQALAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-57 57