Gene Information

Name : Syn6312_3241 (Syn6312_3241)
Accession : YP_007062830.1
Strain : Synechococcus sp. PCC 6312
Genome accession: NC_019680
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3162961 - 3163701 bp
Length : 741 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAATCGCGCCAGCATTGATGTTGAAAATGTCACGGTTAAATATCACGGTAAAGTTGCGCTCCACCAGGCCAGTGTTAA
ACTCGCTCCCGGTTCCATTAGTGGCTTAGTCGGGATGAATGGCAGTGGAAAATCTACCTTATTCAAGGCCATTATGGGAT
TTATCAAGCCCCAGTCCGGTCGGGTTTTAATTAACGGCTTGCCCGTGCGCCAGGCCCAAAAGCGCCATCAGATTGCCTAT
GTTCCCCAGGCTGAAGAAGTGGATTGGCAGTTCCCGGTCAATGTTGCCGATGTGGTGATGATGGGGCGACATGGCTATTT
GAATTGGTTGCGGATCCCCACAGATCAGGATCGGGCGGTGGTCGCGGCCAGTTTAGAGCGGGTGCAGATGGGAGAATTTC
GCGAGCGACAAATTGGCGAACTTTCGGGCGGACAGAAGAAACGGACATTTTTAGCCAGGGCCTTAGCTCAGAACAGTGGG
ATTTTACTTCTAGATGAACCCTTTGCGGGGGTGGATGTTCGGACTGAAAAAGCGATGATTGATTTGCTGTTAGAGTTGCG
GCAACAGGGCTATACGATTTTGATTTCCACCCACGACTTAAGCTCCATTGCCACCTTTTGTGATCAAGTTGTTTTGGTGA
ATAAAACGATTTTGGCCTATGGTGACACGGCTGATGTTTTTACCGAAGAGAATTTAACCCGTACCTTTGGGGGGGTCTTG
CCTCATCAAATTAAAAAATAA

Protein sequence : 
MNRASIDVENVTVKYHGKVALHQASVKLAPGSISGLVGMNGSGKSTLFKAIMGFIKPQSGRVLINGLPVRQAQKRHQIAY
VPQAEEVDWQFPVNVADVVMMGRHGYLNWLRIPTDQDRAVVAASLERVQMGEFRERQIGELSGGQKKRTFLARALAQNSG
ILLLDEPFAGVDVRTEKAMIDLLLELRQQGYTILISTHDLSSIATFCDQVVLVNKTILAYGDTADVFTEENLTRTFGGVL
PHQIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-68 58
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-67 58
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-67 58
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 9e-68 58
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-67 57
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-40 41
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn6312_3241 YP_007062830.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 2e-70 59
Syn6312_3241 YP_007062830.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 4e-68 58
Syn6312_3241 YP_007062830.1 Mn/Zn ABC transporter ATPase BAC0400 Protein 2e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn6312_3241 YP_007062830.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 4e-68 58