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Name : Syn6312_3007 (Syn6312_3007) Accession : YP_007062606.1 Strain : Synechococcus sp. PCC 6312 Genome accession: NC_019680 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 2940377 - 2942392 bp Length : 2016 bp Strand : + Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast DNA sequence : ATGCCAGTCGCAACTACTCAGTCCCTCGAAGAACTTTGTATTAACTCCATTCGCTTTCTTGCCGTTGATGCCGTGGAAAA GGCCAAATCTGGTCATCCCGGTTTACCGATGGGAGCCGCTCCGATGGGGTTTGTCCTCTATGACCAATTTATGCGGTTCA ATCCCAAAAATCCCAAATGGTTTAATCGGGATCGGTTTGTCTTATCCGCGGGTCATGGCAGTATGTTGCAGTATGCCTTG CTCTATTTGACAGGCTATGACAGTGTCACGATTGACGACATTAAAAGCTTTCGACAGTGGAAATCCAAAACTCCCGGTCA CCCGGAAAACTTTGAAACCGCGGGCGTAGAAGTCACCACCGGCCCCCTCGGTCAAGGGATTGCCAATGCGGTTGGGTTAG CCGTTGCTGAAGCCCATTTAGCCGCCACCTATAACAAGCCCGATTGCACATTAGTTGACCATTACACCTATGTGATTTTG GGTGATGGCTGCAACATGGAAGGAATTTCTGGGGAAGCGGCCTCGATTGCTGGTCACTGGGGCCTGGGTAAACTCATTGC TCTCTACGACGACAACCACATTTCAATTGATGGCTCGACGGATGTGGCCTTCACCGAAGATGTCTCGAAACGGTTTGAAG CCTACGGTTGGCACATCCTCCATGTGGAAAACGGCAACACGGATATTGCGGCCATTGCCAAAGCCATCGAAACCGCTAAA TCTGTCACCGACAAACCGACGATGATTAAAGTCACGACCACGATTGGTTATGGCTCACCTAATAAAGCGAATACAGCGGG GGTGCACGGTGCGGCCTTGGGTGGTGATGAAGTCAAGTTAATGCGGGAAAACTTGGGGTGGGAATTTGCCCCCTTTGACG TTCCAGCAGATGCCCTAGCCCACATGCGTAAAGCGATTGAACGGGGAGCCAGCTACGAGGCGGAGTGGCAATCCACCTAT GCCCAATACAAAACCAAATATCCAACAGAAGCAGCGGCCTTTGAGCGGCAAATTTCGGGACAGTTACCCGCTAACTGGGA TAGTGTGCTGCCCACCTACACCGCCGCCGATAAAGCTCTCCCTACCCGGAAAAACTCCGAAACCTGCTTAAACAAACTTG CCCCGGTGCTACCGGAATTGATTGGCGGTTCGGCAGACTTGACCCACTCCAACTTGACCGAACTGAAGGGCTATGGCGAC TTCCAAAAAGGGCAATACCAAAACCGTAACATCCACTTTGGGGTGCGAGAACACGCCATGGGAGCCATCTGTAACGGGAT TGCCTTGCATGGTTCGGGCTTGATTCCCTACGGTGCCACCTTCTTAATTTTCACAGACTATATGCGGGCGGCGATTCGGT TGTCTGCACTGTCTGAGGCTGGGGTAATTTGGGTGATGACCCACGATTCCATTGGGCAAGGGGAAGACGGCCCCACTCAC CAACCGATTGAAACCTTGGCTTCTCTGCGAGCGATTCCCAACTTGACGGTGATCCGGCCCGCCGATGGTACCGAAGCCTC TGGGGCCTACTATGTGGCCATTACCCAGGCCAAGGAACACAAACCCACCCTACTGGCCTTCTCGCGGCAAAACCTGCCCA ACTTGGATACGACCTCGATTGAGGGGGTTACAAAAGGGGCCTATGTGGTAGCTGACTGTGAGGGCACACCGGAGTTGATT TTGATTGGCACGGGTTCTGAGTTGAATCTTTGCATCACAGCGGCGGAGAAGTTAACGGCGGCGGGTAAAAAGGTCCGGGT GGTTTCAATGCCCTCCTTTGACTTGTTCGAAGCCCAAGATGCAGCTTATAAAGAGTCTGTCTTGCCGAAAGCCGTGACCA AGCGGTTATCCGTGGAAGCAGCCTCTAGTTTTGGTTGGCATAAATATATTGGGACTGAAGGCGATACGGTCAGCATTGAT CGCTTTGGGGCTTCGGCTCCCGGTGGTGTGGTCATGGAAAAATTTGGCTTCTCCGTGGACAATGTTTTGGCTAAGGCTGA AGCTCTCTTAGGTTAG Protein sequence : MPVATTQSLEELCINSIRFLAVDAVEKAKSGHPGLPMGAAPMGFVLYDQFMRFNPKNPKWFNRDRFVLSAGHGSMLQYAL LYLTGYDSVTIDDIKSFRQWKSKTPGHPENFETAGVEVTTGPLGQGIANAVGLAVAEAHLAATYNKPDCTLVDHYTYVIL GDGCNMEGISGEAASIAGHWGLGKLIALYDDNHISIDGSTDVAFTEDVSKRFEAYGWHILHVENGNTDIAAIAKAIETAK SVTDKPTMIKVTTTIGYGSPNKANTAGVHGAALGGDEVKLMRENLGWEFAPFDVPADALAHMRKAIERGASYEAEWQSTY AQYKTKYPTEAAAFERQISGQLPANWDSVLPTYTAADKALPTRKNSETCLNKLAPVLPELIGGSADLTHSNLTELKGYGD FQKGQYQNRNIHFGVREHAMGAICNGIALHGSGLIPYGATFLIFTDYMRAAIRLSALSEAGVIWVMTHDSIGQGEDGPTH QPIETLASLRAIPNLTVIRPADGTEASGAYYVAITQAKEHKPTLLAFSRQNLPNLDTTSIEGVTKGAYVVADCEGTPELI LIGTGSELNLCITAAEKLTAAGKKVRVVSMPSFDLFEAQDAAYKESVLPKAVTKRLSVEAASSFGWHKYIGTEGDTVSID RFGASAPGGVVMEKFGFSVDNVLAKAEALLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 4e-152 | 52 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-152 | 52 |
