Gene Information

Name : Syn6312_2730 (Syn6312_2730)
Accession : YP_007062354.1
Strain : Synechococcus sp. PCC 6312
Genome accession: NC_019680
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2684305 - 2686386 bp
Length : 2082 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
ATGAAGATCATAAAACCTCAACCTGGTGGCCCCCGCTCAGCCCGCCGTCACACCCCAAAGGCCAACTTATCTGGACTCTA
TCAACGGGCCGCTACAGAGGCATTTCTGAAATTAGATCCCCGTGTTGCCATCAAAAATCCCGTCATGTTTCTGGTCTGGG
TTGGGACAATCATCACGTTTTTATTAACCCTTAACCCAGGCCTGTTTGGGGTAGTTACCAGTGATCGGTCGCATATTTTC
AATGGCTTAATTTGTTTCATTTTGTTGGCCACCGTTCTATTTGCCAATTTTGCTGAAGCGGTTGCCGAGGGACGCGGAAA
AGCCCAGGCCGACGCCTTACGATCCACCCGTTCTGATATCATTGCTCAAAAGCAAAATCCTGATGGTAGTTTCGTTGCTG
TCAGTTCCAGTGCGCTCCGTAAAGGAGATCGGATTAGAGTTGTCGCTGGAGAAATGATCCCGATGGATGGCGAGGTGTTG
TCCGGGGTAGCAGCCGTGGATGAATCTGCCATTACAGGTGAGTCGGCCCCAGTCCTCAAAGAACCCGGATCCGATGTAGC
CAGTTCGGTAACGGGGGGAACGCGGGTGATTTCCGATGAGCTATTGATTGGGATTACGGTTGATCCGGGTAAAGGCTTTA
TTGATCGGATGATTGCCCTAGTCGAAGGTGCAGAACGCAGTAAAACCCCTAATGAAATTGCCTTAACCGTGTTGTTAGCC
GTTTTAACACTGGTGTTTCTAATTGTGGTTGCCACGTTACCGCCCCCTGCTAATTACATTAACAATCCCGTCAGTGTCGC
CACGTTGATTGCGTTACTAGTTGCGCTAATTCCCACTACGATTGGGGGCCTGTTGAGTGCCATTGGGATTGCCGGAATGG
ATCGGGTGGCGCAGTTTAATGTTGTCGCAACATCGGGGCGAGCAGTCGAGGCCTGTGGTGACATTAATACCCTGGTCTTA
GATAAAACCGGAACCATCACCTTGGGTAATCGCTTGGCTGAGTCCTTTATTCCCGTGAATGGTCATTCATTAGAGAAAGT
TGCCAGTGTTGCTCTAGCTGCCAGTATCTTTGACACCACTCCCGAAGGAAAATCCATCGTCCGTCTCGCGGAACAGTTGG
GAGCTAAGGTTGACTTTGCTTTAGAAACGGCCACCGGGATTGAATTTTCGGCCCGAACCCGGATGAGTGGGACAGATTTA
CCCCAAGGCGCAGAATTTCGCAAAGGAGCTGTAGATGCGATCCGAGGCTTTGTCCGCTCGCGGGGAGGCCAGGCCACGGC
AGATGTGGAAACAGCCTATGAAACGGTGTCTCGTCAAGGAGGAACGCCCTTAGCCGTCTGCCAGGATCAAGAAATTTACG
GGGTAATTTACCTGAAAGACATCATCAAACCAGGGATTCGCGAACGCTTTGCTCAACTGCGGCGGATGGGGGTTAAAACC
GTCATGCTCACTGGCGATAACCGGATCACGGCTCAATATATTGCCCAAGAAGCCGGGGTGGATGACTTTATTGCCGAAGC
GACCCCAGAAGACAAAATTCGAGTCATTCAACAGGAACAGGCAGCCGGAAAGTTAGTTGCGATGACCGGAGATGGCACTA
ATGATGCTCCAGCTCTGGCCCAGGCCAATGTCGGGGTAGCCATGAACTCGGGAACACAAGCCGCCAAAGAAGCTGCAAAC
ATGGTGGATTTAGATTCCGACCCAACAAAGTTGATTGATTTAGTCACGATTGGCAAGCAATTACTCATTACTAGGGGAGC
CTTAACCACCTTTTCTCTTGCTAATGACATTGCTAAATACTTTGCAATTATTCCAGCCATGTTTGCGGCGATTGGGATTG
GAGCCTTGAACGTTATGGGGTTAAAAAGCCCAGAATCCGCCGTGTTGTCTGCCCTGATTTATAACGCTTTGATTATTCCG
GCCTTAATTCCCTTGGCATTAAAAGGGGTAAATTTCCGACCCTTAACCGCAAATCAGTTATTGCAACGGAATATTCTCAT
CTATGGCCTGGGGGGGATTATTGCGCCGTTTATTGCCATTAAAGTCATTGATGTTTTGATTGGTAACGTTGGTATTGTTT
AA

Protein sequence :
MKIIKPQPGGPRSARRHTPKANLSGLYQRAATEAFLKLDPRVAIKNPVMFLVWVGTIITFLLTLNPGLFGVVTSDRSHIF
NGLICFILLATVLFANFAEAVAEGRGKAQADALRSTRSDIIAQKQNPDGSFVAVSSSALRKGDRIRVVAGEMIPMDGEVL
SGVAAVDESAITGESAPVLKEPGSDVASSVTGGTRVISDELLIGITVDPGKGFIDRMIALVEGAERSKTPNEIALTVLLA
VLTLVFLIVVATLPPPANYINNPVSVATLIALLVALIPTTIGGLLSAIGIAGMDRVAQFNVVATSGRAVEACGDINTLVL
DKTGTITLGNRLAESFIPVNGHSLEKVASVALAASIFDTTPEGKSIVRLAEQLGAKVDFALETATGIEFSARTRMSGTDL
PQGAEFRKGAVDAIRGFVRSRGGQATADVETAYETVSRQGGTPLAVCQDQEIYGVIYLKDIIKPGIRERFAQLRRMGVKT
VMLTGDNRITAQYIAQEAGVDDFIAEATPEDKIRVIQQEQAAGKLVAMTGDGTNDAPALAQANVGVAMNSGTQAAKEAAN
MVDLDSDPTKLIDLVTIGKQLLITRGALTTFSLANDIAKYFAIIPAMFAAIGIGALNVMGLKSPESAVLSALIYNALIIP
ALIPLALKGVNFRPLTANQLLQRNILIYGLGGIIAPFIAIKVIDVLIGNVGIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 58
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 58
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-135 58
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-135 58
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 58
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 58