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Name : Syn6312_0260 (Syn6312_0260) Accession : YP_007060044.1 Strain : Synechococcus sp. PCC 6312 Genome accession: NC_019680 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 272769 - 274061 bp Length : 1293 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase DNA sequence : GTGGATGGAACTGCGCCGGTGATTGATCTCAAGCAATTGCGGGAAAACCCGACAGCCATAGAAGCCAAACTCAGTAGCCG AGGTACCTATGATCTCCAGGCCCCTTTAGACCTAGATGCCCAAATCCGGCAACTGGAACACCAACGCTCCCAACTCCAGG CCCGGAGTAATGCCATTGGGGCCGAAGTCGGTCAAAAAATTAAAACAGGCACAGACCCCCAGGCCCCGGAACTGCAAAAC CTCCGTCAAGAAGCCAGCGACATTAAACGCCAACTCAGCGAACTAGAACCCCAAGAGCGGCAACTGCGGGCGGATCTTGA TGCTTTATTATTAATGATTCCTAACTTACCCAGTCCAACTACGCCAATCGGGAAAGATGAAACCGAAAATGTCGAGATTC GCCGTTGGGGGGATGACCTCAAACCGACCCATGCTGTGATTAATCATTGGGATTGGGGGGAACAGCGTGGCCTGCTGGAT GTGCAACGCTCGGTTAAAGTTGCCCAAAGCCGCTTCATTACCTTGATTGGAGCCGCCGCCGCCCTAGAACGCGCGTTGAT TCAATTTATGCTCAGTCGGCATACCCAAAACGGTTATGTGGAAGTTCTGCCGCCGTTTTTAATCAACAGTGACTCCCTCA CGGGCACGGGGCAACTGCCAAAATTTGCCGAAGAAAGCTTTAAGTGTGCTGAGGATGATCTCTGGTTGACCCCCACGGCC GAAGTTCCCGTGACAAATTTATATCGAGATGAGATTTTGGCGGCTGAGACTTTACCGATTTACCACTGTGCCTATACCCC TTGTTTTCGGCGGGAAGCGGGCAGTTATGGGCGGGATACGCGGGGGCTGATTCGCCTGCATCAATTTAATAAGGTGGAAT TGGTTAAGCTTGTGACCCCCGAAACTTCTATAGCCGAGCATCAGGCCTTGGTTAAGGATGCCACGGGGATTCTAGAAGCA CTTGAATTGCCTTATCGAGTCATGGAACTTTGTACGGGCGATTTAGGTTTTTCTGCTAGTAAATGCTATGACCTAGAAGT TTGGCTCCCCTCGGCGGGATGTTATCGGGAAATTTCCAGTTGTTCTAATTTTGGCGATTTCCAGGCCCGGCGGGCAAAAA TCCGTTACAAGGAAGCGGGGAAAAAAGGCACAAACTTTGTCCATACCCTCAATGGCTCTGGCCTGGCGGTGGGACGGACT ATGGCTGCACTTTTGGAAAATCATCAACAACCCAACGGCTCTGTGAAAATTCCTTCAGCCCTGCAACCCTTTTTGGGCCA AGCCTTTCTTTAG Protein sequence : MDGTAPVIDLKQLRENPTAIEAKLSSRGTYDLQAPLDLDAQIRQLEHQRSQLQARSNAIGAEVGQKIKTGTDPQAPELQN LRQEASDIKRQLSELEPQERQLRADLDALLLMIPNLPSPTTPIGKDETENVEIRRWGDDLKPTHAVINHWDWGEQRGLLD VQRSVKVAQSRFITLIGAAAALERALIQFMLSRHTQNGYVEVLPPFLINSDSLTGTGQLPKFAEESFKCAEDDLWLTPTA EVPVTNLYRDEILAAETLPIYHCAYTPCFRREAGSYGRDTRGLIRLHQFNKVELVKLVTPETSIAEHQALVKDATGILEA LELPYRVMELCTGDLGFSASKCYDLEVWLPSAGCYREISSCSNFGDFQARRAKIRYKEAGKKGTNFVHTLNGSGLAVGRT MAALLENHQQPNGSVKIPSALQPFLGQAFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-93 | 48 |
