|
Name : Syn6312_2199 (Syn6312_2199) Accession : YP_007061859.1 Strain : Synechococcus sp. PCC 6312 Genome accession: NC_019680 Putative virulence/resistance : Unknown Product : hydroxymethylpyrimidine synthase Function : - COG functional category : - COG ID : - EC number : - Position : 2151081 - 2152466 bp Length : 1386 bp Strand : + Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC DNA sequence : ATGCGAACTGAATGGATTGCCAAACGGCAGGGCCAGGCCAATGTTTCCCAGATGCATTATGCCCGCCAAGGATTGATTAC CGAGGAAATGGACTATGTGGCCCGGCGAGAGAATTTACCCCCAGATTTAATTCGGGATGAAGTAGCCCGGGGCCGGATGA TTATTCCTGCCAACATCAATCACCCCAACCTAGAACCGATGGCGATTGGGATTGCCTCCAAATGTAAAGTCAATGCCAAC ATTGGGGCCTCGCCTAATTCCTCGAACTTGGCTGAAGAAGTCGCGAAACTGCATCTAGCCGTGAAATATGGGGCCGATAC GGTGATGGATTTGTCCACTGGCGGCGGCAACCTGGATGAAATTCGCACGGCGATTATCCAAGCTTCACCGGTTCCCATTG GCACTGTGCCGATTTACCAGGCCTTGGAAAGCGTTCACGGCAATATCGAAAACCTCACGCCGGATGATTTCTTACATATC ATCGAGAAACACGCGCAACAGGGTGTGGATTATATGACAATCCATGCCGGGATATTAATTGAACATTTGCCCTTGGTTCG CAGTCGGATTACGGGAATTGTCTCGCGGGGTGGGGGCATTATTGCCCGCTGGATGCTGCATCACCACAAACAAAACCCGC TCTATAACCACTTTGACGACATTATCGAAATTTTCAAACGCTATGATGTCTCCTTCTCTTTGGGGGATTCCTTACGGCCT GGTTGTACCCATGATGCCTCCGATGCCGCCCAACTGGCGGAACTGAAAACCTTAGGGCAACTCACCCGCCGGGCCTGGGA GCATGATGTCCAAGTGATGGTTGAGGGACCAGGCCATGTGCCGATGGATCAAATTGAATTTAATGTCCGCAAGCAGATGG AAGAATGTTCCGAAGCTCCTTTCTATGTCTTGGGGCCGTTGGTGACGGATATTGCGCCAGGCTACGACCACATCACCTCA GCAATTGGGGCAGCCATGGCCGGCTGGTACGGGACAGCGATGTTGTGTTACGTCACCCCGAAAGAGCACCTGGGTTTACC CAATGCTGAAGACGTCCGCAATGGTTTAATTGCCTATAAAATTGCCGCCCATGCCGCAGATATTGCCCGCCACCGGCCGG GTGCCCGAGATCGGGATGATGAACTGTCCACCGCCCGCTATAACTTTGACTGGAATCGCCAGTTTGAGCTTTCCTTAGAT CCGGAACGGGCCAAGGAATATCACGATGAAACCCTCCCCGCGGACATCTATAAAACCGCCGAATTTTGTTCCATGTGTGG GCCGAAGTTCTGCCCGATGCAAACCAAGGTGGATGCCGATGCTCTGACGGAGTTAGAGAAGTTTCTCGCCCAAGATCAAG AAAAACGGGTCATGGCGGAAGTTTAG Protein sequence : MRTEWIAKRQGQANVSQMHYARQGLITEEMDYVARRENLPPDLIRDEVARGRMIIPANINHPNLEPMAIGIASKCKVNAN IGASPNSSNLAEEVAKLHLAVKYGADTVMDLSTGGGNLDEIRTAIIQASPVPIGTVPIYQALESVHGNIENLTPDDFLHI IEKHAQQGVDYMTIHAGILIEHLPLVRSRITGIVSRGGGIIARWMLHHHKQNPLYNHFDDIIEIFKRYDVSFSLGDSLRP GCTHDASDAAQLAELKTLGQLTRRAWEHDVQVMVEGPGHVPMDQIEFNVRKQMEECSEAPFYVLGPLVTDIAPGYDHITS AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRPGARDRDDELSTARYNFDWNRQFELSLD PERAKEYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDADALTELEKFLAQDQEKRVMAEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-126 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-126 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 5e-123 | 57 |
