Gene Information

Name : Syn6312_1808 (Syn6312_1808)
Accession : YP_007061496.1
Strain : Synechococcus sp. PCC 6312
Genome accession: NC_019680
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 1793218 - 1794186 bp
Length : 969 bp
Strand : +
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence : 
ATGACTGCTGTTTCTTCTCCTAGCCAAACTGTGCGGATTGGTTCCCGTAAAAGTCAACTGGCCCTGGTGCAAACCGAATG
GGTACAAGCTGAATTACAGCAACGGCATCCCGAGCGGCAGTTTGATGTGGTGACCATGAGCACCCAAGGGGACAACATTC
TCGATGTGGCCTTAGCCAAGATTGGGGATAAGGGCCTCTTTACCAAAGAATTAGAGGTCTCAATGCTCCGGGGAGATACA
GACTTAGCCGTTCATTCCCTCAAGGATTTACCCACCCACTTACCCGATGGCTTGATGCTGGGGGCAATCACAGAGCGAGA
AGATCCTGCCGATGGCCTGGTGGTCAATGCCAAGTTCAAAGATCATCAACTCGATACCTTACCCGCTGGTTCTGTGATTG
GTACGTCCTCGTTACGGCGGCTGGCCCAACTCCGGCATTATTTCCCTGACTTAACCTTCAAAGATGTGCGGGGCAATCTC
AATACCCGCTTACAAAAATTAGATGCGGGTGAATATGATGGCCTAATTTTGGCTGTGGCTGGGTTAAAACGCCTGGGTTT
TGGGGCCCGAATTCAACAGGTCATTCCCCCAGAGATTTCCCTGCACGCAGTCGGACAAGGAGCTTTGGGGATTGAGTGCC
GCGCTGCTGATCCAGAAATTTTAGGCATTGTCAAAACCCTAGAACATTACCCCACGGCGCAACGCTGCTTGGCAGAACGG
GCCTTTCTCCGGGAGCTAGAAGGGGGATGCCAGGTACCCATTGGGGTGAATACGCAAATTAATGGGGATGAATTGACCTT
GACGGGCCTGGTGGCTAGTTTAGATGGACAGAACCTGGTTAAAAACGAGATCACTGGGCCAATCACAGCAGCCGAGGGCC
TGGGGGTTAAACTTGCAACTCAACTCAAAGGGCAGGGCGCAGCTAAGATTTTAGCTGAGATTTTCACAGAAGTTCGTCCG
GGCACTTGA

Protein sequence : 
MTAVSSPSQTVRIGSRKSQLALVQTEWVQAELQQRHPERQFDVVTMSTQGDNILDVALAKIGDKGLFTKELEVSMLRGDT
DLAVHSLKDLPTHLPDGLMLGAITEREDPADGLVVNAKFKDHQLDTLPAGSVIGTSSLRRLAQLRHYFPDLTFKDVRGNL
NTRLQKLDAGEYDGLILAVAGLKRLGFGARIQQVIPPEISLHAVGQGALGIECRAADPEILGIVKTLEHYPTAQRCLAER
AFLRELEGGCQVPIGVNTQINGDELTLTGLVASLDGQNLVKNEITGPITAAEGLGVKLATQLKGQGAAKILAEIFTEVRP
GT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-64 51
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-64 51