Gene Information

Name : Riv7116_0836 (Riv7116_0836)
Accession : YP_007053966.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Unknown
Product : transcription antitermination protein nusG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1066167 - 1066808 bp
Length : 642 bp
Strand : +
Note : PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG

DNA sequence :
ATGAATTCTGCAACAGACGAAGATCGTAATTCGCCGTTGCAGTCAGAGGAAACAGATGCACCATCAAATAATGGCGTTAA
GTCATCTCGTTGGTATGCAGTACAAGTAGCCTCTGGCTGCGAGAAGCGTGTAAAAACAAACTTGGAGCAGCGTATTCAAA
CTTTTGATGTCGCTGATAAAATTATCCAAGTAGAAATTCCGCACACGCCAACAGTCAAGATTCGTAAAGATGGCAGTCGC
TACAGTACAGAAGAAAAGGTATTTCCTGGCTATGTACTGGTAAAAATGCAAATGGAAGATGATATATGGCAGGTAGTGCG
AAACACTCCCCATGTAATCAACTTCGTAGGCGCAGAACAAAAGCGAGGTACTGGTAGAGGTCGCGGTCATGTGAAACCGC
TGCCACTTTCTCATAGTGAAGTAGAAAGAATCTTTAAGCAAGCTACCGAACAACAGGAAGTAGTCAAGGTTGACATGGCT
ACTGGTGATAAGATAGTCGTGCTTTCAGGTCCATTTAAAGATTTTGAAGGTGAAGTTATCGAAGTCAGTCCGGAAAGAAG
CAAGCTTAAAGCATCGCTTTCGATTTTCGGAAGAGAAACGCCAGTAGAATTGGAATTTAATCAAGTAGAGAAACAAAGCT
AG

Protein sequence :
MNSATDEDRNSPLQSEETDAPSNNGVKSSRWYAVQVASGCEKRVKTNLEQRIQTFDVADKIIQVEIPHTPTVKIRKDGSR
YSTEEKVFPGYVLVKMQMEDDIWQVVRNTPHVINFVGAEQKRGTGRGRGHVKPLPLSHSEVERIFKQATEQQEVVKVDMA
TGDKIVVLSGPFKDFEGEVIEVSPERSKLKASLSIFGRETPVELEFNQVEKQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nusG YP_281502.1 transcription antitermination protein NusG Not tested Not named Protein 2e-27 41