Gene Information

Name : Riv7116_6194 (Riv7116_6194)
Accession : YP_007059092.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7843207 - 7844025 bp
Length : 819 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAAATTAGAAACTAAAACTCACTACCAACTCTCAACCAAAAATCTCACATTAGGTTACGAAAATACAAATATAATTAA
AAATATCGATTTAAGCATACCTCAAGGAAAAATTACCGCTTTGGTTGGTGCGAATGGCTGCGGTAAATCTACATTGTTGC
GGGGTTTAGCAAGACTGTTAAAACCCTTTCACGGAACTATTTATTTAGATTCTAGCGACGTATTTGAATTATCGACAAAA
GCCGTTGCGAAAAAGTTAGGAATTCTTTCTCAATCACCAGTTGCACCGGAAGGTTTGACTGTAAAAGATTTAGTTGCTTG
CGGACGATATCCTTATCAAAATTGGTTGCAGCAATGGACTAAGGAAGATGAACGTTTTGTGGATATAGCTTTAGAAACTA
CTCGAATGAAAGAGTTTGCAGAACGGGAATTAGATACTCTTTCTGGGGGACAGCGACAGCGAGCTTGGATTGCAATGGCT
TTGGCTCAAGATACTGATATTTTACTATTAGATGAGCCGACAACTTTTTTGGATTTAGCGCATCAAATTGAGGTGTTAGA
TTTGCTGTGGGAATTGAATCAAAATCAAGGACGAACTTTGGTAATGGTATTACACGATTTAAACCAAGCTTGTCGCTATG
CTGATTATTTAGTAGCAGTTAATAAAGGGAATATTTATACACAAGGTAAACCGGAAGATGTGATGAATGAAAAGATGGTT
TTAGATGTGTTTGGGTTGGAATGTAAGATTATACCCGATCCAGTTTCGGATACTCCGATGTGCCTTCCAATTGGTAGGAA
GGGTAAGTATAATTCGTAA

Protein sequence : 
MKLETKTHYQLSTKNLTLGYENTNIIKNIDLSIPQGKITALVGANGCGKSTLLRGLARLLKPFHGTIYLDSSDVFELSTK
AVAKKLGILSQSPVAPEGLTVKDLVACGRYPYQNWLQQWTKEDERFVDIALETTRMKEFAERELDTLSGGQRQRAWIAMA
LAQDTDILLLDEPTTFLDLAHQIEVLDLLWELNQNQGRTLVMVLHDLNQACRYADYLVAVNKGNIYTQGKPEDVMNEKMV
LDVFGLECKIIPDPVSDTPMCLPIGRKGKYNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-59 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-61 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-61 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-62 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-59 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-59 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-59 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-59 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-51 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-51 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-51 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-51 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-55 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_6194 YP_007059092.1 cobalamin/Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 3e-59 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_6194 YP_007059092.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG0925 Protein 1e-65 51
Riv7116_6194 YP_007059092.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 3e-59 50