Gene Information

Name : Riv7116_6193 (Riv7116_6193)
Accession : YP_007059091.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7842050 - 7843096 bp
Length : 1047 bp
Strand : +
Note : PFAM: FecCD transport family

DNA sequence : 
ATGAAGACAAGTACAATCGTTTTTCGCTCTAGATTACTTCCGATTTCTTTCCGCCTCAAAAAGCGCGTTCCCATAGTCTT
ATTAATTTTAATTCTGATTACCTTAACCGCAATGGTAATGAATACTTCCTTTGGGGAATATCCTATTCCACCGCTTGCAG
TTATTCAAACCGTCTTGGGTATAGATACGGGAAATGCAGATTATGGCTTTGTAATTAACACTTTACGCTTACCAAGAACC
CTTACTGCTTGTCTTGTAGGTATGGCTTTAGCGATTTCCGGCACTATTATGCAAGGTATAACTCGGAACCCTCTTGCCGA
TCCAGGAATTATTGGTATTAATGCCGGTGCAAGTTTAGCAGCGGTCACTTTGATTGTATTATTACCAAATGTACCTGCGG
GAATATTGCCTATAGTTGCTTTTATCGGTGCTTTGATAGCTTCGTTATTAATTTATTTTCTAGCTTGGGATAGAGGTACC
CATCCGGTACGTTTAATTTTAATAGGTGTGGGAATTGCGGCGGTAGCTAGTGCTTTTACAAATTTGATGGTGACATTTGG
CGATATTTATAATGTTAGTCAAGCATTAGTATGGTTAGCGGGAAGCGTTTACGGACGCAGTTGGGAACAACTTTTTTCAT
TACTACCTTGGTTAATTGTTTTTATACCCTTAGCTTTTATAAATGCACCACAATTAAATGCTTTGAATTTAGGAGAAGAC
ATAGCTAAAGGTTTGGGTAGTAAAGTTGAATGGCAACGGAGTTTTTTATTATTAATTAGTGCTGCATTATCGGGAGCAGC
AGTAGCGACAGCAGGAACAATTGGATTTGTAGGATTAATAGCACCTCATATAGCTCGTCAATTAGTAGGAAATATTCATG
AAGGATTAATTCCCGTAGCTGCAATGACAGGAGCAATGATTGTAGTTATAGCTGATTTTTTAGGAAGAATTTTATTTGCT
CCCATAGAACTTCCTTGTGGAATTATTACTGCTGTGATTGGTGCGCCTTATTTTGTTTATTTGTTAGTTAGGAGTAGGAG
GAAATGA

Protein sequence : 
MKTSTIVFRSRLLPISFRLKKRVPIVLLILILITLTAMVMNTSFGEYPIPPLAVIQTVLGIDTGNADYGFVINTLRLPRT
LTACLVGMALAISGTIMQGITRNPLADPGIIGINAGASLAAVTLIVLLPNVPAGILPIVAFIGALIASLLIYFLAWDRGT
HPVRLILIGVGIAAVASAFTNLMVTFGDIYNVSQALVWLAGSVYGRSWEQLFSLLPWLIVFIPLAFINAPQLNALNLGED
IAKGLGSKVEWQRSFLLLISAALSGAAVATAGTIGFVGLIAPHIARQLVGNIHEGLIPVAAMTGAMIVVIADFLGRILFA
PIELPCGIITAVIGAPYFVYLLVRSRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 5e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_6193 YP_007059091.1 Fe3+-siderophore ABC transporter permease BAC0163 Protein 2e-39 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_6193 YP_007059091.1 Fe3+-siderophore ABC transporter permease VFG1043 Protein 3e-39 43