Gene Information

Name : Riv7116_5925 (Riv7116_5925)
Accession : YP_007058834.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 7480779 - 7482548 bp
Length : 1770 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGGAACTAAGAGATTCAATACGCCGGACAAAAATTGTTGCTACGATTGGACCTGCTACCAGCAGCCCTGAAGTCCTTAA
GGCTCTCATTGAAGCAGGTGCAACAACGCTGCGGCTTAATTTCTCTCACGGAACTCATGCCGACCATCAGCGTAATATCA
GGTCGATTCGGCAGACAGCATTTGAATTAAACAAGCCAGTGGCGATTCTGCAAGATTTGCAGGGTCCAAAAATTCGTTTG
GGTAAGTTTGAAAACGGGTCGATAGTTGTTGCTAAAGGCGACCGTTTCACTTTGACCAATCGTCAAGTCGTTGGTACTCA
GGAAATTAGCTGCATTACCTACGAGCGTTTAGCACAAGAAGTACCCGTTGGTGCGAATATTCTTCTTGATGATGGACGAG
TAGAAATGCAGGTTGTGGAGGTAAACAAAGAAAAAGGTGATTTGCATTGCATTGTAACGGTTGAAGGCAAGCTGTCTAAT
AATAAAGGTGTGAATTTTCCTGGTGTTTATTTGTCAATTAAGGCATTAACTGATAAAGACCGCGAGGATTTAGTTTTTGG
TTTAGACCAAGGTGTAGATTGGGTTGCACTTTCTTTTGTTCGCAATCCCCAAGATGTTATGGAAATTAAGGAATTGATTT
CCAACGCAGGAAAACAAGTACCAGTAATTGCCAAAATAGAGAAGCACGAAGCCATTGAACAAATGGAAGCGGTTCTGGCT
TTATGTGATGGCGTGATGGTAGCGAGAGGGGACTTGGGTGTGGAACTTCCAGCAGAAGATGTTCCCGTGCTGCAAAAACG
TCTAATTGCGACTGCAAACCGTTTGGGTATTCCGATTATTACCGCTACCCAAATGCTAGACAGTATGGTTAGCAATCCTC
GTCCGACGCGAGCAGAGGTATCGGACGTAGCTAACGCAATACTAGATGGTACGGATGCCGTAATGCTTTCTAACGAAACT
GCTGTGGGTAAATACCCGGTGGAAGCAGTCGCAACTATGGCTAGGATTGCCGAACGCATTGAGAAAGAAGATGCTCAAAG
TAAAAATACCAATCAGCTGCCAGATCCAAGACGTTCGATTCCTAATGCTATTTCTCAAGCAGTAGGTCAAATTTCTAAGC
AACTTAAAGCTGCTGCAATTATGACACTTACTCAAAGTGGCGCAACAGCTCGGAATGTTTCTAAATTCCGTCCTCGTACT
CCAATTCTGGCGGTTACACCCCATGTAAACGTAGCCAGACAACTGCAATTGGTATGGGGAGTTAAACCATTATTAGTTTT
AGAACTACCTTCAACCGGTCAAACTTTTCAAGCGGCTATTAATGTCGCTCAAGAAAAAAACTTATTGCACGAAGGTGATT
TAGTTGTGATGAGTGCGGGGACTCTTCAAGGAGTTTCTGGTTCTACTGACTTGGTTAAAGTTGAAATAGTAACTGCGGTA
CTTGGTCAAGGTGTAGGATTGGGACAAGGTTCTGTGACGGGACGCGCGCGAGTCGCTTCGAGTGGTATGGAATTAAATAA
TTTCAATCCTGGAGAGATTTTGGTAGCGCCGCGTACAAATGCAGATTTTGTCGAAGCAATTCGTAAATCCAGTGGCATCA
TTACTGAGGAAGAAAGTCTTACTTCTCATGCCGCTGTAATTGGCTTACGTTTAGGAGTTCCTGTAATTGTAGGTGTTAAA
AATGCAACTCAAGCGATTAGGGATGGAGCTATTTTAACTATGGATATACAGCGGGGTGTAGTTTACTCCGGAGCAGTGGG
AACTGCTTAA

Protein sequence :
MELRDSIRRTKIVATIGPATSSPEVLKALIEAGATTLRLNFSHGTHADHQRNIRSIRQTAFELNKPVAILQDLQGPKIRL
GKFENGSIVVAKGDRFTLTNRQVVGTQEISCITYERLAQEVPVGANILLDDGRVEMQVVEVNKEKGDLHCIVTVEGKLSN
NKGVNFPGVYLSIKALTDKDREDLVFGLDQGVDWVALSFVRNPQDVMEIKELISNAGKQVPVIAKIEKHEAIEQMEAVLA
LCDGVMVARGDLGVELPAEDVPVLQKRLIATANRLGIPIITATQMLDSMVSNPRPTRAEVSDVANAILDGTDAVMLSNET
AVGKYPVEAVATMARIAERIEKEDAQSKNTNQLPDPRRSIPNAISQAVGQISKQLKAAAIMTLTQSGATARNVSKFRPRT
PILAVTPHVNVARQLQLVWGVKPLLVLELPSTGQTFQAAINVAQEKNLLHEGDLVVMSAGTLQGVSGSTDLVKVEIVTAV
LGQGVGLGQGSVTGRARVASSGMELNNFNPGEILVAPRTNADFVEAIRKSSGIITEEESLTSHAAVIGLRLGVPVIVGVK
NATQAIRDGAILTMDIQRGVVYSGAVGTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-91 46
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-91 46
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-91 46
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-91 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_5925 YP_007058834.1 pyruvate kinase VFG0479 Protein 3e-91 46