Gene Information

Name : Riv7116_5886 (Riv7116_5886)
Accession : YP_007058795.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7429803 - 7430570 bp
Length : 768 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGACTATTTCTCAAAATCGATGTATAGTGACTTCCAGAATTGACAGTTGGAATGATTCAAAGTCTATTGATGTAAGTAA
ATTGAAAACTTCTGCTATTTCTGCCAGAGGAGTAGAAATGGTGTATCAATCTGGTAAGCAGCGTTACGTAGCACTAAAGG
GGATTGATTTAGATATTCCTAAAGGTACTATCCAGTTGCTCATGGGGCATTCCGGCTCTGGAAAAACTACATTACTATCA
ATTCTGGCAGGGATTTTGACTCCTACTTCTGGGAGCATCAATCTTTTGGGAGAGGAAATTACGCGAATGTCTCGTAAAAA
GTTATCTCGCTTTAGAAGAGATAATATTGGTTTTATTTTTCAAGGGTTCAACCTTTTTGGTGCCTTAAATGCAGTAGAGA
ATGTGCAACTTGCTTTAGAAATAAAAGGTATTAAGGGAAAATCTGCGACTAATCAGGCTTTAGAACTACTGGATATGGTT
GGTTTAGCAAACAAAGCCAACTTACTTCCTCGTGACTTATCTGGTGGGCAAAAACAAAGGATAGCAATAGCTCGTGCTTT
AGCGGGAAATCCTCAGTTGATTATGGCTGATGAACCAACTGCGGCACTAGATTCTCATAACGGGCAAGCCGTTATCGAAT
TATTGTGTAATTTAGCTAAAGAAGGTGGGAGTACGGTTGTTATGGTGACTCACGATTCCCGAATTCAAAGTTTTGCTGAT
AATGTCGCGTTTTTAGAAGATGGTGAAATTACTGAAAATTATCTTTAA

Protein sequence : 
MTISQNRCIVTSRIDSWNDSKSIDVSKLKTSAISARGVEMVYQSGKQRYVALKGIDLDIPKGTIQLLMGHSGSGKTTLLS
ILAGILTPTSGSINLLGEEITRMSRKKLSRFRRDNIGFIFQGFNLFGALNAVENVQLALEIKGIKGKSATNQALELLDMV
GLANKANLLPRDLSGGQKQRIAIARALAGNPQLIMADEPTAALDSHNGQAVIELLCNLAKEGGSTVVMVTHDSRIQSFAD
NVAFLEDGEITENYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_5886 YP_007058795.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-41 44
Riv7116_5886 YP_007058795.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 7e-32 43
Riv7116_5886 YP_007058795.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-28 42
Riv7116_5886 YP_007058795.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-32 41