Gene Information

Name : Riv7116_5640 (Riv7116_5640)
Accession : YP_007058555.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7087233 - 7087886 bp
Length : 654 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGGAATCAATTACCAAACATTACTTATTAGGAGAAGTCAAGGTTCCTATTCTCAAAGGTATTAACCTGACAATTGTAAA
AGGTGAATATTTGGCAATAATGGGCGCTTCCGGTTCTGGTAAATCTACTCTTATGAATATTATGGGTTGTTTAGACCGCG
CGAGCAGCGGTAGTTACACTCTAGAAGGTCGAAAATTAACTAGTTTTAATAATGATGAATTAGCCTACACCCGCAATCAA
AGAATTGGCTTTGTATTTCAACAATTCAATTTATTGCCTCGTGCAACTGCTTTAGAAAATGTCATGTTACCGATGGTTTA
TGCAAGTACTTCCAAACCAGAACGTCTTCAACGAGCGGAAGCTGCTTTAATTAAAGTTGGATTAGCAGATAGAATTAATA
ACCGTCCCAATCAATTATCAGGGGGACAACAGCAAAGAGTTGCAATTGCTCGCGCTTTAGTTAATAATCCCGCTATTATT
TTGGCAGACGAACCTACTGGTGCATTAGATACCCAAACTTCCCATGAAGTTATGGATTTGTTCGCAGAATTAAATGCACA
AGGAATCACAATCATAATTGTCACCCACGAACATGATATTGCAGAAATTACCCAGCGTATTATTCGCGTTCAAGATGGTT
TAATTATTAGTTAA

Protein sequence : 
MESITKHYLLGEVKVPILKGINLTIVKGEYLAIMGASGSGKSTLMNIMGCLDRASSGSYTLEGRKLTSFNNDELAYTRNQ
RIGFVFQQFNLLPRATALENVMLPMVYASTSKPERLQRAEAALIKVGLADRINNRPNQLSGGQQQRVAIARALVNNPAII
LADEPTGALDTQTSHEVMDLFAELNAQGITIIIVTHEHDIAEITQRIIRVQDGLIIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_5640 YP_007058555.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-52 55
Riv7116_5640 YP_007058555.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 6e-48 49
Riv7116_5640 YP_007058555.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 4e-39 47
Riv7116_5640 YP_007058555.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-37 45
Riv7116_5640 YP_007058555.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 6e-34 43