Gene Information

Name : Riv7116_5537 (Riv7116_5537)
Accession : YP_007058453.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase, KdpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6960654 - 6962336 bp
Length : 1683 bp
Strand : -
Note : PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA

DNA sequence :
ATGGGACAAGGTTTTTTGCAGATAGGTTTAACCCTACTTTTAGTGCTAATAGTTACGCCAACTTTTGGCAAATACATAGC
CAAGGTCTTTATGGGTAGAACAACATTACTTGATAGAGTAATGAATCCATTAGAACTACTGATTTACAAGCTAGCAGACG
TAAATCCTCAAGAAAATATGAGAGGTAAAGAGTATGCCTATTGCGTTTTGCAAAGCAACTTGTTTATCGGTCTTTTAGTG
TATTTATTCATTAGTTTTCAAAAGTTTTTGCCGTGGAATCCGAGTAATCTGGGTGCGCCTCGTTGGGACTTAACACTACA
CACGACAATTTCATTTTTAACCAATACGGGGCAGCAACATTACTTAGGAGAAAAAACCCTCAGCCATTTCAGCACCATGG
CTGGTTTAACCTTTTTGATGTTTGTTTCAGCAGGCACGGGTTTAGCAATTGGTATCGCTTTTATTCGTGGCTTGACGGGC
AAACCTTTAGGAAATTATTATGCGGATCTAATTAAAGCAATAACCCGCATATTGCTGCCAATTTCTATTGTGGGAGCCAT
CCTGTTGCTGGCTCAGGGAGTACCGCAAACCTTAGCAGCATCTGTAGCAGTAGAAACCTTGGAGGGAAGGACTCAGTATA
TTGCCACTGGTCCTGTAGCATCTTTTGAAATTATCAAACTATTAGGTACAAATGGCGGCGGTTTTTTTGGTGCAAATTCC
GCTCATCCCTTTGAAAATCCTAATAGTTTTACCAACTTAGTCGAAATTATCGCAATGATATCTATTCCAGCAGCGATGAT
TTTTGTTTATGGCGAATTTTCTCACAATATTAAACAAGCATGGCGGCTGTTTTGGATGATATTTCTCATCTTCCTAGCTT
TACTTTGGATAACCGCAGTTGGAGAATTTCAAGGCAATCCTTTAGTAAATTCTAATTTAGGATTTGACCAACCCAATTTA
GAAGGAAAAGAGGTTCGATTTGGGTGGGCACAAACGGCATTGTGGGCGGTTGTAACTACCGCAACTATGAATGGTGCAGT
TAACGGAATGCACGATTCATTAATGCCTGCTGCAGGTTTTTCTACCTTATTAAGTATGTTTTTGCACGTAATTTGGGGTG
GAATCGGAACCGGAATTATTTACTTATTAATTTATCAATATTTAACCGCATTTTGGGCAGGATTAATGATAGGTAGGACT
CCGGAATTTTTCGGACGTAAAATCACAAGAACTTCAATAGTTTTAGCAAGTTTAGTAATTTTAATTCATCCCATTGCTGT
ATTGATTCCCAGCGCTATAGCTTTAGCTTATCCCATATCCTTGTCGGGAATCAGCAATCCCGGCTTTCACGGTGTATCCC
AAGTTGTATACGAATATATATCAGCCAGCGCTAATAATGGTTCCGGATTTGAAGGCTTGATAGACGGAACATTTTGGTGG
AATTTAAGTACTTCAGCCAGTATGTTAGTGGGACGATACGTTTTTCTATTCGCCGTCTTACTTTTAGCAGACATTATGGT
ACATACAAAACCAGTACCTGAGATTCCTGCTACCCTAAAAACCGACACACTTTTATTTACCAGTCTCAGTGCCGGAGTAA
TTTTTATTTTAAGCTTTCTAATTTTCTTCCCTATTTTAGTCAATGGTCCCTTAGCCGAAGGTTTGAGACTCGCAGCACAG
TGA

Protein sequence :
MGQGFLQIGLTLLLVLIVTPTFGKYIAKVFMGRTTLLDRVMNPLELLIYKLADVNPQENMRGKEYAYCVLQSNLFIGLLV
YLFISFQKFLPWNPSNLGAPRWDLTLHTTISFLTNTGQQHYLGEKTLSHFSTMAGLTFLMFVSAGTGLAIGIAFIRGLTG
KPLGNYYADLIKAITRILLPISIVGAILLLAQGVPQTLAASVAVETLEGRTQYIATGPVASFEIIKLLGTNGGGFFGANS
AHPFENPNSFTNLVEIIAMISIPAAMIFVYGEFSHNIKQAWRLFWMIFLIFLALLWITAVGEFQGNPLVNSNLGFDQPNL
EGKEVRFGWAQTALWAVVTTATMNGAVNGMHDSLMPAAGFSTLLSMFLHVIWGGIGTGIIYLLIYQYLTAFWAGLMIGRT
PEFFGRKITRTSIVLASLVILIHPIAVLIPSAIALAYPISLSGISNPGFHGVSQVVYEYISASANNGSGFEGLIDGTFWW
NLSTSASMLVGRYVFLFAVLLLADIMVHTKPVPEIPATLKTDTLLFTSLSAGVIFILSFLIFFPILVNGPLAEGLRLAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 6e-68 42
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 6e-68 42
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 4e-68 42
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 5e-68 42
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 6e-68 42
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 6e-68 42
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 1e-52 41
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 2e-52 41