Gene Information

Name : Riv7116_5536 (Riv7116_5536)
Accession : YP_007058452.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6958394 - 6960505 bp
Length : 2112 bp
Strand : -
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit

DNA sequence :
ATGCCTATGAATCCAGTCGCGACTACTTCCAAATCTACACTTGCCACTTCTAATCCTAAAGAACTTCGTTCTTTACGTAA
AAAAGTAAAGGCAAATAAAAAAGGTCTTTATCGTAGAGCCATAAAAGACTCTTTTATTAAATTAAATCCTAAATATACTA
TTAGAAATCCAGTCTTAGTAGTAGTTTGGGTAAGCACGATTATCACCTTAATTACGACAATTTTTCCCACATTATTTGGC
TCAAAAGCAACTGCCAATACCCAAATTTTTAACGGCACAGTTACAGCAGTTTTATTCTTAACACTACTGCTGGCTAATTT
TGCCGAAGCTTTTGCTCAAAGTCGTGGTAAAGCACAGGCTGATGTGTTGCGTTCGATTAAATCCGATATTAATGCCAAAC
AACTCTTTGCCGACGGTACCATTGCCGAAGTTCCCGCTACAAATTTGCAACGTGGCGACACAGTATATGTTGTAGCTGGT
GATATTATTCCTACCGACGGCGAAGTAATTATGGGTGCTGCCAGCGTTGACGAAGGTGCTATCACTGGAGAAACAGCGCC
AGTACTTAAAGAAGCTGGTTCCGATGTTGCTAGTTATGTTACCGGTGGTAGCCGTATTATTTCTGATGAATTGATAGTCA
GAATTACAGTCGATCCAGATAAAGGGTTTATCAACCGGATGATTCATATTATTGAGAGGAGAGAACGCAAAAAAACACCA
AATGAAGCGACTCTGACAGTTTTACTAGCTTTAATTAGCTTAATCTTTTTATCAACGATCGCCACTTTTCCGGCACTGGC
GTATTACGTTAAAACTCCTATTAGCGTCACTATTTTGGTGGCAATTTTTGTGGCATTAATTCCCACAACTGTTGGCAGCT
TGCTCAGTGCTACCACTATTGGAGGTATGGATCGGGTTGCTCAATTAAACTTAATTGCCACCTCCGCTAGAGCCATAGAA
GCCTGTGGAGATGTCAACACTTTAATTCTCGATAAAACAGGAACTGTAACCAGAGGAAACCGTTTAGCAGATGGTTTTAT
TCCAATTAACGGTCACACAATGGGTGAAATTGCTTATGTAGCTCTAGCAGCAAGTATATATGATGATACTTCAGAAGGAA
AATCAATAGTCCGTTTAGCGCAAAAACTAGGAGCAAGAATTGATTTCGATTATGAAGCAGCTTTATCTATAAAATTCAGC
GCCAGAAGCAGAATAGGCGGTACCGATTTACCTAATGGTTCGATGGTTCGTAAAGGTGCTGTAGATGCAATCAAAAACTT
TGTGCAATTGCAAGGTGGGGAAGTTTCATCAGAACTAAATTCAGCTTACGAAATGGTATCTAAACAAGGAGGTACACCGT
TAGCTGTATGTATGAATGAGGAAATTTACGGCATTATTTATTTGAAAGATAACCTAAAACCAGGTATACGCGAGCGTTTC
GGACAATTACGAAGACTCGGGGTGCGTACCATCATGATTACTGGTGACAATCACATCACTACTTCTGTAATTGCTAAAGA
AGCTGGGGTTAAAGAATTTATCGCTGAAGCAACCCCCGAAAATAAAATTGCTGTGGTTCAACGAGAACAAGCAGAAGGTA
AACTGGTCGCAATGACAGGGGATGGTACAAATGATGCAGCAGCTTTAGCCCAAGCAAATGTTGCGGTTGCCATGAACAAC
GGAACCCAAGCAGCAAAAGAAGCAGCAAATATCATCGACTTGGACTCCGATCCCACGAAACTAATCGATATTATTGGCAT
CGGCAAACAAGTACTGATGACTCGTGGTGCTTTAATAACCTTTTCAGTCGCAAACAATATAGCTAAGTATTTTGCAATTA
TTCCATTAGTATTTGCTTCGAGCAGTATCAACAAACTAAACGTCATGAACTTGACAAGCATTAATTCTGCCGTGCTGTCA
GTACTGATTTACAACGCATTAATTATTCCGGCATTAATTCCTTTAGCGCTTAGGGGTGTACCATTTCAAGTAATGACACC
CAATCAACTTCTACAGCGTAATTTTTTGATTTATGGTTCGGCAGGATTAATTATTCCATTTATTACCATTAAATTAATAG
ACCTAATAATTTCTCTAACAGTTTTAGCCTAA

Protein sequence :
MPMNPVATTSKSTLATSNPKELRSLRKKVKANKKGLYRRAIKDSFIKLNPKYTIRNPVLVVVWVSTIITLITTIFPTLFG
SKATANTQIFNGTVTAVLFLTLLLANFAEAFAQSRGKAQADVLRSIKSDINAKQLFADGTIAEVPATNLQRGDTVYVVAG
DIIPTDGEVIMGAASVDEGAITGETAPVLKEAGSDVASYVTGGSRIISDELIVRITVDPDKGFINRMIHIIERRERKKTP
NEATLTVLLALISLIFLSTIATFPALAYYVKTPISVTILVAIFVALIPTTVGSLLSATTIGGMDRVAQLNLIATSARAIE
ACGDVNTLILDKTGTVTRGNRLADGFIPINGHTMGEIAYVALAASIYDDTSEGKSIVRLAQKLGARIDFDYEAALSIKFS
ARSRIGGTDLPNGSMVRKGAVDAIKNFVQLQGGEVSSELNSAYEMVSKQGGTPLAVCMNEEIYGIIYLKDNLKPGIRERF
GQLRRLGVRTIMITGDNHITTSVIAKEAGVKEFIAEATPENKIAVVQREQAEGKLVAMTGDGTNDAAALAQANVAVAMNN
GTQAAKEAANIIDLDSDPTKLIDIIGIGKQVLMTRGALITFSVANNIAKYFAIIPLVFASSSINKLNVMNLTSINSAVLS
VLIYNALIIPALIPLALRGVPFQVMTPNQLLQRNFLIYGSAGLIIPFITIKLIDLIISLTVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-118 52
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-118 52
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-118 52
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-118 52
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 9e-119 52
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-118 51
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-115 49
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-115 49