Gene Information

Name : Riv7116_3963 (Riv7116_3963)
Accession : YP_007056950.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Resistance
Product : DevA family ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4940542 - 4941276 bp
Length : 735 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family

DNA sequence :
ATGGAACCTGTTGTATCTATAAAAAATCTCAATCACTTTTTTGGTCGTTCTCAATTACGAAAGCAAGTATTATTTGATAT
CAATTTAGAAATTAACGCAGGTGAAATTATTATCATGACTGGGCCATCTGGTTCTGGTAAAACAACACTGCTAACTTTAA
TTGGTGGATTACGTAGTGCGACATCAGGTAGCTTGCAGGTATTAGGACGGGAATTACTTAATGCTAGTCCCAGAAGATTA
ACTAATGTGCGACGAAGTAACGGTTATATTTTTCAAGCACATAATTTACATGGCAGTTTAACAGCGATACAAAACGTCAA
AATGGGTTTGGAAGTACATAAAAACCTTTCCCGTTCGCAAATGCAAACTCGCTCCCAAGAAATGTTAGAGGCTGTAGGTT
TAGAATCGCGGTTGAATTATTATCCAGATGATTTGTCAGGAGGACAAAAGCAGCGAGTCGCTATAGCGCGTGCCTTGGCT
CCTCATCCCAAAATTATCTTAGCCGACGAACCCACTGCTGCTTTAGATAGTAAATCGGGTAGGAATGTAGTTAACCTCAT
GCAAAAACTAGCTAAGCAGCAAGCTTGCACTATCCTTTTAGTTACTCACGATAACCGTATCCTCGACATTGCAGACCGGA
TTGTAAATATGGAAGATGGTCGTTTAGTTGGAGTGGGAGAAGCCCAAAACCTAGCGGATAGAGAATGTGTCGGGGAAACA
ATCAACTCAAATTGA

Protein sequence :
MEPVVSIKNLNHFFGRSQLRKQVLFDINLEINAGEIIIMTGPSGSGKTTLLTLIGGLRSATSGSLQVLGRELLNASPRRL
TNVRRSNGYIFQAHNLHGSLTAIQNVKMGLEVHKNLSRSQMQTRSQEMLEAVGLESRLNYYPDDLSGGQKQRVAIARALA
PHPKIILADEPTAALDSKSGRNVVNLMQKLAKQQACTILLVTHDNRILDIADRIVNMEDGRLVGVGEAQNLADRECVGET
INSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_3963 YP_007056950.1 DevA family ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-25 43
Riv7116_3963 YP_007056950.1 DevA family ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-26 41