Gene Information

Name : Riv7116_3363 (Riv7116_3363)
Accession : YP_007056369.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4182732 - 4183412 bp
Length : 681 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGGCAACTATGATTTGGATGGAAGGCATTGAAAAAACTTATTGTTTAGGGGAAAGCAAAATTCCAATACTCAAGGGGAT
TAATTTATCTATCGAAGAAGGCGAATATGTTGCAATTATGGGGATGTCTGGTTCGGGAAAGTCTACACTGATGAATATTA
TTGGTTGTCTCGACCGCCCAACATCTGGATATTATGTTCTAGAAGGTAGAAATCTGACTACACTAACTAATGATGAGTTG
GCATATATCCGCAATCAACATATCGGTTTTGTGTTTCAGCAATTTAATTTACTACCTCGCTCCACGGCTTTAGAAAACGT
CATGCTGCCAATGGTGTATGCAGGTATTTCTAAATCGCAACGCAAAAAACGGGCTGAGTCAGCCTTAATCCGCGTTGGCT
TAGCAGAGCGAATGTTAAACCGTCCCAATCAGATGTCTGGCGGACAACAGCAGCGAGTAGCCATTGCCCGTGCCCTCGTC
AACCGTCCTAAACTTGTTTTAGCAGACGAACCCACAGGAGCATTGGACACCCAAACTTCCGGGGAAGTGATGAATTTACT
AACCGAACTTAATAGTCAAGGTATCACAATCGTTATTGTCACCCACGAGCCAGATGTCGCCAACCAAACCAACCGCATTA
TTCACGTCAAAGATGGTTTAGTGACTCACAAAGTAACCTAG

Protein sequence :
MATMIWMEGIEKTYCLGESKIPILKGINLSIEEGEYVAIMGMSGSGKSTLMNIIGCLDRPTSGYYVLEGRNLTTLTNDEL
AYIRNQHIGFVFQQFNLLPRSTALENVMLPMVYAGISKSQRKKRAESALIRVGLAERMLNRPNQMSGGQQQRVAIARALV
NRPKLVLADEPTGALDTQTSGEVMNLLTELNSQGITIVIVTHEPDVANQTNRIIHVKDGLVTHKVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-32 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_3363 YP_007056369.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-58 56
Riv7116_3363 YP_007056369.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-51 51
Riv7116_3363 YP_007056369.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-41 47
Riv7116_3363 YP_007056369.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-38 42
Riv7116_3363 YP_007056369.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686946. Protein 6e-32 42
Riv7116_3363 YP_007056369.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 2e-30 41