Gene Information

Name : Riv7116_3085 (Riv7116_3085)
Accession : YP_007056107.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3842071 - 3842733 bp
Length : 663 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGATTTATCTAGAATCTATTAGAAAAAACTATTTTCTGGGAGAGGTGGATATTAGCGTACTTAAAGGCATTAATTTGTC
TATTAAAGAAGGTGAATATATTGCTATTATGGGTGCATCCGGTTCGGGAAAATCTACTTTAATGAATATTCTTGGCTGCT
TGGATCGTCCAACGGCGGGAGACTATATTTTTGAAGATAGAAATTTGAGTAGTCTTAACGATGATGAATTAGCATATATC
CGCAATCAACGGATAGGTTTTATATTTCAGCAATTTAATTTATTGCCCCGCTCAACTGCGATAGAAAATGTTATTTTGCC
GATGGTTTATGCTAATATTCCAAAGCAAAAACGTCGCGAATATGCAGAAGAAGCATTAGTAAAAGTCGGATTAGCAGAAC
GTATTTTTAACCGTCCAAATCAACTTTCTGGAGGGCAACAACAAAGAGTGGCGATCGCACGAGCATTAGTTAATCAGCCA
GCTTTAGTTTTAGCAGACGAACCTACTGGTGCATTAGATACTCAAACATCCCAAGAAGTAATGGATTTGTTATCAGAATT
AAATCAACAAGGCATTACAATTGTGATAGTAACTCACGAAGAAGATATCGCCGCTCAAACAAAGCGAATCATTAGAGTTC
AAGATGGTTTAATTGTGTCTTGA

Protein sequence :
MIYLESIRKNYFLGEVDISVLKGINLSIKEGEYIAIMGASGSGKSTLMNILGCLDRPTAGDYIFEDRNLSSLNDDELAYI
RNQRIGFIFQQFNLLPRSTAIENVILPMVYANIPKQKRREYAEEALVKVGLAERIFNRPNQLSGGQQQRVAIARALVNQP
ALVLADEPTGALDTQTSQEVMDLLSELNQQGITIVIVTHEEDIAAQTKRIIRVQDGLIVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_3085 YP_007056107.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 9e-57 56
Riv7116_3085 YP_007056107.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-48 49
Riv7116_3085 YP_007056107.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-41 47
Riv7116_3085 YP_007056107.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 9e-41 45
Riv7116_3085 YP_007056107.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686946. Protein 6e-31 41