Gene Information

Name : Riv7116_3034 (Riv7116_3034)
Accession : YP_007056060.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3753211 - 3753933 bp
Length : 723 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGATTGCAAATGCTCCAGCAAAAGCCATTTTTCAAATCCAGGAAATTACTAAAGTTTACCGTATGGGTGAGGTGGAAGT
AAAAGCGCTAAACTCGGTTAACCTAAATCTGTATGAAGGGGAATTAGTAGTTTTATTAGGTCCTTCGGGAAGCGGTAAGT
CAACTTTACTTAATATTATCGGTGGCTTAGATATACCTTCAAACGGTCATGTTTTCTTTCATCAACGAGATTTAACTCAC
GCGAACGATACAATACTGACTCGCTTTCGTCGCGAATGCGTTGGCTTTATTTTTCAATTTTACAATCTTATACCCAGTCT
TACGGCACGGGAGAATGTTGCCCTTGTTACCGAAATTGCCTCAAATCCCATGCGTCCAGAACAAGCATTAGAATTAGTCG
GTTTAGAAGAAAGATTAAATCATTTCCCCTCACAGATGTCCGGAGGAGAACAACAAAGAGTGGCGATCGCCCGCGCTATA
GCCAAACGTCCGGAAGTACTGCTATGCGACGAACCAACTGGGGCGCTTGACTTTCAGACGGGCAAGTTAGTCTTATCAGC
CCTCGAAAGAGTCAACCGCGAACTCGGAACTACAACCGCAGTAATTACTCATAATGCTGGTATTGCAGCAATGGCTGACA
GGGTAATAACTATGCGTAGTGGCGAGATTACAAGTATTCATTGTAACGAGGTAAAGCTAGAGCCTGAAGAATTGGAATGG
TAA

Protein sequence :
MIANAPAKAIFQIQEITKVYRMGEVEVKALNSVNLNLYEGELVVLLGPSGSGKSTLLNIIGGLDIPSNGHVFFHQRDLTH
ANDTILTRFRRECVGFIFQFYNLIPSLTARENVALVTEIASNPMRPEQALELVGLEERLNHFPSQMSGGEQQRVAIARAI
AKRPEVLLCDEPTGALDFQTGKLVLSALERVNRELGTTTAVITHNAGIAAMADRVITMRSGEITSIHCNEVKLEPEELEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_3034 YP_007056060.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 1e-52 50
Riv7116_3034 YP_007056060.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-30 44
Riv7116_3034 YP_007056060.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-38 43
Riv7116_3034 YP_007056060.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-37 42
Riv7116_3034 YP_007056060.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 7e-38 41