Gene Information

Name : Riv7116_3008 (Riv7116_3008)
Accession : YP_007056036.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3717444 - 3718190 bp
Length : 747 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCTAAAATTACAGTTCACGTAGAAGATACTACAGTTGCTTATAACGGTAAAGTAGCTTTGCATGAAGCGAATTTACA
ACTAAATCGCGGTTCTATCAGCGGCTTAGTGGGAATGAATGGTTCGGGTAAATCGACTTTATTTAAAGCAATTATGGGTT
TTGTTAAACCGACAAATGGGCGTATATTAATTCAAGGGATGCCCATGAAGAAGGCGCAAAAACAAAATTTAGTTGCTTAT
ATTCCTCAATCTGAAGATGTAGACTGGAATTTTCCTATCAACGTACAAGATGTAGTAATGATGGGGCGCTACGGGTATAT
GAACTTCTTAAGAATTCCTCGTGCAAATGACCGAAAAGCTGTAGCAGAAAGTTTAGCGCGAACTAACATGAGCGAATTAA
AATATCGCCAAATTGGGGAACTTTCAGGAGGACAAAAAAAGAGAGCATTTGTAGCGCGTGCTTTGGCACAACAAGCACAA
ATAATTCTCTTAGATGAACCCTTTGCCGGAGTAGATATTAAAACAGAAAAAGCACTGATTCAACTTTTGATAGAATTACG
TAATATGGGTCATACAATTTTAATTTCAACCCATGACCTTTCTTCAATTTCTACATTTTGTGATGATGTGGTATTAATCA
ATCGTACCATTTTGGCATATGGTCCGACGGGAGAAGTTTTTACGCAAGAGAATATTGCCCGTACCTTTGATGGAATGGTT
CCAGTCGCAGGAATTGGTAATGGGTAA

Protein sequence : 
MSKITVHVEDTTVAYNGKVALHEANLQLNRGSISGLVGMNGSGKSTLFKAIMGFVKPTNGRILIQGMPMKKAQKQNLVAY
IPQSEDVDWNFPINVQDVVMMGRYGYMNFLRIPRANDRKAVAESLARTNMSELKYRQIGELSGGQKKRAFVARALAQQAQ
IILLDEPFAGVDIKTEKALIQLLIELRNMGHTILISTHDLSSISTFCDDVVLINRTILAYGPTGEVFTQENIARTFDGMV
PVAGIGNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-62 56
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-62 56
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-61 56
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-61 56
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-62 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_3008 YP_007056036.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 2e-64 59
Riv7116_3008 YP_007056036.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 1e-62 56
Riv7116_3008 YP_007056036.1 Mn/Zn ABC transporter ATPase BAC0400 Protein 2e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_3008 YP_007056036.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 9e-63 56