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Name : Riv7116_0259 (Riv7116_0259) Accession : YP_007053411.1 Strain : Rivularia sp. PCC 7116 Genome accession: NC_019678 Putative virulence/resistance : Virulence Product : putative nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 322781 - 324844 bp Length : 2064 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein DNA sequence : ATGAATAGTTTATTCATGGTTTCTCATTGGCTGCTTGATAGATCGACAAAAGTTATGTTTAACAATTTGTTGAAATTGAG AAACCGTCATTTACTGATTTTTGACGTTATTGTTTTTGCTTTTACGCCGCTCTTAGCTTTGATACTGCGTTTAGATGGCG ATTTAGCTCTTGAGCCATATGTATCTGACTTAATTACAGTAACTTTAATTTTTTTGACAGTTAAAATCGGTGTTTTTTAT AGTTTTGGTTTCTATCGGCGCTATTGGCGTTATGCAGGTGTAGAAGAATTGAGCTATGTAGCCATGTTGATAGTGGCTGC GATGGTAATTCAAACTTTACTATTCGATGTTATTAACTTTACCATACCTTGGGCTGTTGATACACTACCAAGGTCGCTAC CGTTTCTCGATGGATTGCTTTCTTGTATTTTTATTGGAGCATTACGTTTTAGCGTTCGAGTTGTTGAGAGAACCAGACAT TCGCGTCTAGCTTTTACTCGTAGATTCCACAATCAAGACGAACGAGTACTGATAGTTGGTGCTGGAAGTGCTGGAGTAAG TCTCGTACAGGAAATGCAAACCAGTAGTGACTTAGGTTTCCGTCCTGTAGCCTTCATTGACGACGATGTAACCAAATTCA ACGCACGCATTCGGGGAATTCATGTAGTTGGCGATCGCCATTCAATTCCCGAAGTTCTAGAGCCTTTGAGGGTAGATAAA GTAATTATTGCCATGCCTTCAGTGGCGGGAGAAGTGATTCGAGAAATCGTTGATATTTGTAAGTCCGCCGGAATACAAGC CTGTACCTTACCGGGAATAAACGAAATACTCAACGGTAAAGTTAGCTTGAATAGCATTCGCGACGTGAGAATCGAGGACT TGCTCAGACGCGAACCCGTACAAACCGAAATTGAAAAAGTAGCTGAATTTATCAATGGAAAAAGAGTTTTAATTACTGGC GCGGGTGGCTCTATTGGTAGCGAACTTTGCCGTCAGATTTGCTCTTGTCGTCCCAAGGAAATAATGTTGGTGGGACATGG AGAAAATTCCGTTTTTACGATTCAGCAAGAATTGAATCAGCTTGTAAAACTTTTACAAGAAGATAGTAAAGCTTCGGGGT ACGCACCAAGAATTTTAGGATTTATAGCCGATATTCGCTTCAAAGATAGACTTAGGAACGCCTTTGACAAATTCCAACCG GACGTTGTTTTCCATGCAGCAGCCCACAAACACGTGCCCTTGATGGAATTGAATTCACCAGAAGCCATCACTAACAATGT AATTGGGACTAAAAATTTAGTTGAGGAAGCATTACGATGCAACGTTAACCATTTCGTCATGATTTCCACCGATAAAGCGG TAAATCCCACCAATATTATGGGAGCCAGTAAGAGAGTTGCAGAAATGGTGGTTCTGCAAGCCGCGAAGCAAAGCGGTAAA TCTTATGTAGCCGTGCGTTTTGGTAATGTTTTAGGTAGTCGCGGTAGCGTTGTTCCTACATTTAAAAAGCAAATTGCCGC AGGTGGTCCGATAACTGTAACTCATCCGGACATCTGTCGTTACTTCATGACGATTCCCGAAGCAGTACAGTTAGTGTTAC AGGCAGCAGTTTTGGGTAGAGGTGGCGAAGTACTGATGCTGAACATGGGCGAGCCTGTAAAAATTGTCGATTTAGCATCA GAATTAATTAGACTTTCTGGTTATAGGGTGAATAAAGATATAGACATTGTTTTTACAGGCTTGCGACCGGGAGAGAAATT ATTTGAAGAGCTGTTTATAGAAGGAGAAGAATACGACCCGACAGAACATGAAAAGCTGTTTATGGTGAAGAATTCAAGCC GAATTATACCAAAAAGTCTGAATGTTTCCGTAGATGCACTTTGTCAAGCTGCTGGTAAAAACGATACAAATTCTATTAAG TTTTTATTAGAGCAATTGGTGCCTGGGTACAAGCCTAAGTATTTGGATAATTTAGGGCACAAAGAGAGCTTGAGAAATAG TAATTCTGCTGAGAAAGAAGCGACAGAAGGGAATAAGATCAAAATTGAACCTAAAAACGCGTAA Protein sequence : MNSLFMVSHWLLDRSTKVMFNNLLKLRNRHLLIFDVIVFAFTPLLALILRLDGDLALEPYVSDLITVTLIFLTVKIGVFY SFGFYRRYWRYAGVEELSYVAMLIVAAMVIQTLLFDVINFTIPWAVDTLPRSLPFLDGLLSCIFIGALRFSVRVVERTRH SRLAFTRRFHNQDERVLIVGAGSAGVSLVQEMQTSSDLGFRPVAFIDDDVTKFNARIRGIHVVGDRHSIPEVLEPLRVDK VIIAMPSVAGEVIREIVDICKSAGIQACTLPGINEILNGKVSLNSIRDVRIEDLLRREPVQTEIEKVAEFINGKRVLITG AGGSIGSELCRQICSCRPKEIMLVGHGENSVFTIQQELNQLVKLLQEDSKASGYAPRILGFIADIRFKDRLRNAFDKFQP DVVFHAAAHKHVPLMELNSPEAITNNVIGTKNLVEEALRCNVNHFVMISTDKAVNPTNIMGASKRVAEMVVLQAAKQSGK SYVAVRFGNVLGSRGSVVPTFKKQIAAGGPITVTHPDICRYFMTIPEAVQLVLQAAVLGRGGEVLMLNMGEPVKIVDLAS ELIRLSGYRVNKDIDIVFTGLRPGEKLFEELFIEGEEYDPTEHEKLFMVKNSSRIIPKSLNVSVDALCQAAGKNDTNSIK FLLEQLVPGYKPKYLDNLGHKESLRNSNSAEKEATEGNKIKIEPKNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-94 | 44 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-100 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Riv7116_0259 | YP_007053411.1 | putative nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 1e-91 | 43 |
