Gene Information

Name : Riv7116_2381 (Riv7116_2381)
Accession : YP_007055444.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2952426 - 2953154 bp
Length : 729 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
TTGGAGAGTCATAAAGAAAAAATCCTGGTGGTAGACGACGAAGCCAGCATTCGCCGGATTTTAGAAACGCGCCTTTCGAT
GATTGGCTATGACGTGGTCACGGCTGGCGACGGGGAAGAAGCTTTGGATACCTTTCGCAAAGCAATTCCTGATTTAGTTG
TTTTAGATGTAATGATGCCGAAGCTTGACGGCTATGGTGTCTGTCAGGAATTGCGTAAGGAATCCGATGTCCCAATCATT
ATGCTAACAGCTTTGGGAGATGTGGCAGACAGAATTACCGGTTTAGAACTCGGTGCTGATGACTATGTCGTAAAACCATT
TTCCCCCAAAGAATTAGAAGCTCGTATCCGTTCTGTACTAAGACGAGTAGATAAAACTAGTGCTTCTGGAATTCCCAGTT
CTGGAGTTATACATGTAAGTACTATTAAAATCGACACAAATAAGCGTCAAGTCTATAAAGGTGACGAACGCATTCGATTA
ACAGGAATGGAATTTAACCTGTTAGAACTCTTAGTAAGTCGTTCGGGAGAAGCTTTTTCTCGTTCGGAAATTTTACAAGA
AGTTTGGGGATATACACCGGAACGTCATGTTGACACCCGTGTAGTAGACGTACATATTTCCCGTTTGCGAGCTAAATTAG
AAGATGACCCTTCAAATCCAGAATTAATTTTAACCGCAAGAGGTACGGGGTACTTGTTTCAACGCATAATTGAACCGGGG
GACGAATGA

Protein sequence :
MESHKEKILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFRKAIPDLVVLDVMMPKLDGYGVCQELRKESDVPII
MLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKTSASGIPSSGVIHVSTIKIDTNKRQVYKGDERIRL
TGMEFNLLELLVSRSGEAFSRSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPELILTARGTGYLFQRIIEPG
DE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-30 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 9e-47 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-46 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-46 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 9e-47 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-46 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 9e-47 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-46 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-46 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-46 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-46 48
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 3e-44 47
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 4e-38 45
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 4e-41 45
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 1e-42 45
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 6e-36 43
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 1e-36 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 1e-36 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 1e-36 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 1e-36 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 1e-36 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 1e-36 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 1e-36 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 1e-36 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000675.2.gene1535. Protein 7e-39 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene5135. Protein 2e-25 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 2e-28 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 3e-38 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 7e-36 41
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 2e-34 41
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 2e-29 41
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 2e-28 41
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 2e-29 41
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 3e-33 41
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 2e-28 41
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 5e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 1e-39 45
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 2e-30 42
Riv7116_2381 YP_007055444.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 1e-32 42