Gene Information

Name : Riv7116_2267 (Riv7116_2267)
Accession : YP_007055334.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2804266 - 2805000 bp
Length : 735 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
GTGCTAGAAGTAGAGCATTTGGACGTAGATTACCGGGGTGTAGTGGCTGTTGAGGATGTGAGTTTTTGCGTTTCCCCCGG
ACAGATGGTTGGTGTAATCGGTCCAAATGGCGCTGGTAAAAGCACTTTGGTTAAAGCGATACTCGGTTTAATTCCGGTTT
CAGATGGCACTATTAAATTTTGTAACTGTCCCATCCACAAGCAATTACGCTCCATTGCTTACGTACCTCAAAGAACCCAA
GTAGATTGGGATTATCCGATTACGGTACAGAATGTAGTGATGATGGCTCGTACTGTAAGCACGGGTTGGTTTCGCAAGCC
AAGCCGTAAGTCTAAAGAAATAGTTAAATCTGCATTGCATAGAGTAGGGATGTGGGAATTTCGTTCTCGTCAAATCGGTG
AGTTATCCGGAGGACAACAGCAGCGGGTATTTTTAGCTAGAGCGCTAGCACAGCAAGCTGATTTATTATTTTTTGACGAA
CCGTTTGTGGGAATTGATAAAAGCACTGAAGATATCATGTTTAATATTTTCAATGAATTAAGAAGGGATGGCAAGATATT
AATTTTAATTACTCACGATCTAGGTGAAACTTTAGCTCAATGTGACTTTTTATTATTGTTAAACAAACATATTATCGCTG
ATGGTTCGATGAAGGAAGTTGTTACAACCGAAAATTTACAGCGTGCTTATGGCAATAATATTTTATTTTTAAATAGACAA
GAAAAATCGGCTTAA

Protein sequence : 
MLEVEHLDVDYRGVVAVEDVSFCVSPGQMVGVIGPNGAGKSTLVKAILGLIPVSDGTIKFCNCPIHKQLRSIAYVPQRTQ
VDWDYPITVQNVVMMARTVSTGWFRKPSRKSKEIVKSALHRVGMWEFRSRQIGELSGGQQQRVFLARALAQQADLLFFDE
PFVGIDKSTEDIMFNIFNELRRDGKILILITHDLGETLAQCDFLLLLNKHIIADGSMKEVVTTENLQRAYGNNILFLNRQ
EKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-33 44
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-33 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-40 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-40 42
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-41 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-39 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_2267 YP_007055334.1 Mn/Zn ABC transporter ATPase BAC0400 Protein 1e-39 48
Riv7116_2267 YP_007055334.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 7e-40 45
Riv7116_2267 YP_007055334.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 5e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_2267 YP_007055334.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 5e-41 42