Gene Information

Name : Riv7116_2017 (Riv7116_2017)
Accession : YP_007055099.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 2493403 - 2494866 bp
Length : 1464 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGCCCTATGCCCCATGCCCAATTCCCAAATCCATGCGTAAAACCAAAATCATCTGCACTGTAGGTCCCGCTACATCAAC
ACCCGAAAGTCTAAAAGCTTTAGTAGATGCGGGGATGAATGTAGCTCGGCTAAATTTTTCTCACGGGGATTATCAATTCC
ACGGTAAAACCATTGAAATTCTCAGAAGTATACCTACTCCTCCGGAAAAACCTGTAGCTTTGATGCAGGATTTATGCGGA
CCAAAAATCCGTTTGGGTATGCTTCCGGATGCAGGTTTAATAGTGGAAGAGGGAGAAGAAGTTACTTTTGTCGAACAAGA
AAAAGGCAACAATATTGATGAGTTGCCTTTACCTATACCAACTTTATTTGCAATGGTTAGAGTTGGCGAACCGATTGCGA
TTAATGATGGGCGGATTAAGTTGACTGTTATTGATAGAGATGCGGATAAAATTCGCGCCCTTGTCAAAATTGGCGGCAAA
ATTTCTTCTCGTAAAGGAGTAAATCTACCTCAAACTCATCTCCCGGTTAGTTCGATCACCGAAAAAGATTTATTAGACTT
ACGCTTCGGCATTCAAAATGATTTAGATTTAGTTGCAGTTTCCTTTGTTCGTTCTCCTGCTGATTTAGAGCCAGCCCGAC
GAATGATTGAAGCCGCAGATAAAAAAATTCGTATTATTGCCAAAATAGAAAGACGGGAAGCTGTTGAAAACTTTGATGAT
ATTTTAGAAGTCGTTGACGGAATTATGGTAGCCCGTGGTGACTTGGGTGTTGAGGTTCCCTTAGAACAAGTTCCGTTAAT
TCAAAAAGACATCATTCATCGTTGTAACCGCGCTGGAAAACCTGTTATCACTGCTACACAGATGTTGGAATCAATGATAA
ATGCTTCCGACCCCACGAGAGCAGAAGTTACCGATGTTGCCAACTCTATAGTTGATGGTACTGATGCTATTATGCTTTCC
GGAGAAACAGCAGTTGGTAAATATCCGATTGCAGCTGTTGAGATGATGGGCAAAATAGCCGTAGAAACTGAAAAGTCATT
ACCCGACGGCACTTTAAAATCATATGCTTACCAAGCTGGTAGTCTTAGCGTTACAGAATCTGTCGCCGAAGCTGTATGTC
GTATGGCTTATGAAGTAGGGGCAAAGGCTATTTTATGTCATACTTCATCGGGAGATACGGCAAGATTGGTTTCTAAATAT
CGTCCCACCACTAGAATAATAGCTCTTACACCCGCAGAAATTTCCTATCGTCAATTAGCCCTTTCCTGGGGAGTTGAACC
CTTAATTATCCAGCAGGCTTCTGAGACAGAGCAAATGTTAATTAATCTCATCGAGACAACTGTAAAAATGAGAATTGCTC
AACAAGGGGATAAGGTAGTAATTACATCCGGTATACCCGTAGGTAAGCCAGGAAGCACTAGTTTAATCAAGGTACATACT
ATTGGACAAGCTATTTCGGCCTGA

Protein sequence :
MPYAPCPIPKSMRKTKIICTVGPATSTPESLKALVDAGMNVARLNFSHGDYQFHGKTIEILRSIPTPPEKPVALMQDLCG
PKIRLGMLPDAGLIVEEGEEVTFVEQEKGNNIDELPLPIPTLFAMVRVGEPIAINDGRIKLTVIDRDADKIRALVKIGGK
ISSRKGVNLPQTHLPVSSITEKDLLDLRFGIQNDLDLVAVSFVRSPADLEPARRMIEAADKKIRIIAKIERREAVENFDD
ILEVVDGIMVARGDLGVEVPLEQVPLIQKDIIHRCNRAGKPVITATQMLESMINASDPTRAEVTDVANSIVDGTDAIMLS
GETAVGKYPIAAVEMMGKIAVETEKSLPDGTLKSYAYQAGSLSVTESVAEAVCRMAYEVGAKAILCHTSSGDTARLVSKY
RPTTRIIALTPAEISYRQLALSWGVEPLIIQQASETEQMLINLIETTVKMRIAQQGDKVVITSGIPVGKPGSTSLIKVHT
IGQAISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-68 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-68 42
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-68 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-68 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_2017 YP_007055099.1 pyruvate kinase VFG0479 Protein 5e-69 42