Gene Information

Name : Riv7116_1412 (Riv7116_1412)
Accession : YP_007054522.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.11
Position : 1789149 - 1790438 bp
Length : 1290 bp
Strand : -
Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase

DNA sequence :
GTGCTAGATATCAAGCAAATACGGGAAAATCCCCAATTAATTCTAGAAAGGTTGAAGAATCGAGGCGAGAATTACGATAT
TCAGCCAATTGTTGATTTAAATCAACGACAGCGCGATTTAGAGACAACCAGAAGTCAAATTCAAGCTCGTAGTAACGAAA
TTGGTAAGTTAGTAGGACAAAAAATTAAGTCAGGTACTAACCCTCAAGATGCAGAAATTAAAGAATTACGAGACGAAGGA
AATTCTCTTAAAGCAAAACTAAGCGAATTTGAACCGCAAGAGAAAGAGATTAAAGCTGAAATTGACCAAAGAGTGCTTGC
ACTTCCTAATTTGCCTAGCGAGTCTACACCTATTGGCAAGAGCGAAGAAGAGAATGTAGAAGTGCGACGTTGGGGTGATG
AATATTTACCTCAAAACTCAGGTATTATTCCTCATTGGGAAATCGGTGAAAAGTTAGGAATTCTTAACTTTGAACGAGCC
GTCAAAATCGCACAAAGTCGTTTTGTTGCTTTGATTGGTGCTGGTGCAGCTTTGGAAAGGGCATTAATTCAATTTATGCT
CAATCGTCAAGTGGAAGCTGGGTATGTTGAAGTAGTGCCTCCCTTTTTGATTAATAGTGAATCTTTAACAGCTACGGGAC
AACTGCCCAAATTCGCCGAAGACAGCTTTAAATGTGCTGAGGATGATTTATGGCTTACCCCTACAGCAGAAGTTCCTTTA
ACAAATCTTTACCGTAATGAAATTCTTAGTACGGAAGATTTACCGATATATCACTGCGCTTATACTCCTTGTTTTCGTCG
CGAAGCGGGAAGTTACGGGCGCGATATGCGGGGATTAATTCGCTTGCATCAATTTAATAAAGTTGAGTTAGTAAAATTAG
TTAGTCCAGAAACCTCTTTTGACGAACTAGAAAAATTACTTAATAATGCCGAAGCTATTTTACAAGCTTTGCAATTACCT
TATCGAGTCATCGAACTTTGTACTGGAGATTTAGGATTTTCCGCCACAAAAACTTACGATATAGAAGTTTGGCTGCCTTC
AAGTGGTAAGTATCGTGAAATTTCCAGTTGTTCTAATTGTGGGGACTTTCAAGCGAGAAGAGGTAATATTCGTTTCAAGT
CAGCCGGTAAAAAAGGAACCCAATTTGTTCATACACTTAATGGTTCCGGATTAGCAGTAGGGCGAACTATGGCAGCTATT
TTGGAAAACTACCAACAACCCGACGGTACCCTGCACGTTCCACAAGTTTTGCAGCCCTACTTAGGTGGTAAGGAAATTTT
AGAAGTTTAG

Protein sequence :
MLDIKQIRENPQLILERLKNRGENYDIQPIVDLNQRQRDLETTRSQIQARSNEIGKLVGQKIKSGTNPQDAEIKELRDEG
NSLKAKLSEFEPQEKEIKAEIDQRVLALPNLPSESTPIGKSEEENVEVRRWGDEYLPQNSGIIPHWEIGEKLGILNFERA
VKIAQSRFVALIGAGAALERALIQFMLNRQVEAGYVEVVPPFLINSESLTATGQLPKFAEDSFKCAEDDLWLTPTAEVPL
TNLYRNEILSTEDLPIYHCAYTPCFRREAGSYGRDMRGLIRLHQFNKVELVKLVSPETSFDELEKLLNNAEAILQALQLP
YRVIELCTGDLGFSATKTYDIEVWLPSSGKYREISSCSNCGDFQARRGNIRFKSAGKKGTQFVHTLNGSGLAVGRTMAAI
LENYQQPDGTLHVPQVLQPYLGGKEILEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 6e-102 49